ggKbase home page

L1_007_365G1_scaffold_452

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_452_1
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(415..2877)
DNA (2463bp) protein (821aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NWC3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15495.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L1_007_365G1_scaffold_452_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3099..4424
DNA (1326bp) protein (442aa)
Efflux ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BV25_9BIFI
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEG69999.1}; Putative ABC transporter permease component {ECO:0000313|EMBL:BAR04338.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
peptide ABC transporter permease
L1_007_365G1_scaffold_452_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4421..5605
DNA (1185bp) protein (395aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV26_9BIFI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEF28785.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_452_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5724..6515)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BV27_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70001.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
phosphohydrolase
L1_007_365G1_scaffold_452_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6640..7524)
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BV28_9BIFI
Glutamine amidotransferase {ECO:0000313|EMBL:KEF28787.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
glutamine amidotransferase
L1_007_365G1_scaffold_452_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7726..9903)
DNA (2178bp) protein (726aa)
Probable potassium transport system protein kup n=2 Tax=Bifidobacterium RepID=C0BV30_9BIFI
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
potassium transporter Kup
L1_007_365G1_scaffold_452_7
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10135..11091)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NTL8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15503.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hydrolase TatD
L1_007_365G1_scaffold_452_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11213..13573)
DNA (2361bp) protein (787aa)
alpha-arabinofuranosidase I (EC:3.2.1.55)
Carbohydrate binding domain protein n=2 Tax=Bifidobacterium RepID=C0BV32_9BIFI
Carbohydrate binding domain protein {ECO:0000313|EMBL:EEG70006.1}; Putative alpha-L-arabinofuranosidase {ECO:0000313|EMBL:BAR04344.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L1_007_365G1_scaffold_452_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13570..13803)
DNA (234bp) protein (78aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Possible alpha-galactosidase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3M3_BIFAA
alpha-galactosidase
L1_007_365G1_scaffold_452_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13820..13963)
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BV34_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70008.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
alpha-galactosidase
L1_007_365G1_scaffold_452_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14207..15439
DNA (1233bp) protein (411aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV35_9BIFI
LacI family transcriptional regulator {ECO:0000313|EMBL:KEF28791.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
LacI-type transcriptional regulator
L1_007_365G1_scaffold_452_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15525..17963)
DNA (2439bp) protein (813aa)
Alpha-galactosidase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV36_9BIFI
Alpha-galactosidase {ECO:0000313|EMBL:BAR04348.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
alpha-galactosidase
L1_007_365G1_scaffold_452_13
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18127..18849)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BV37_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15508.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L1_007_365G1_scaffold_452_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19043..20830)
DNA (1788bp) protein (596aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV38_9BIFI
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEF28794.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
multidrug ABC transporter ATP-binding protein
L1_007_365G1_scaffold_452_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20861..22723)
DNA (1863bp) protein (621aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV39_9BIFI
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEF28795.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter permease
L1_007_365G1_scaffold_452_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23116..24213
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NXK7_9BIFI
Lipase {ECO:0000313|EMBL:KEF28796.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
lipase
L1_007_365G1_scaffold_452_17
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24732..24920
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q1Q3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15907.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L1_007_365G1_scaffold_452_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25032..25853
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NXK2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15905.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
acetyl esterase
L1_007_365G1_scaffold_452_19
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26117..27298)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XST0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB22293.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L1_007_365G1_scaffold_452_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27442..29859)
DNA (2418bp) protein (806aa)
Glycosyl hydrolase, family 31 n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FD40_9BIFI
Alpha-xylosidase
Alpha-xylosidase {ECO:0000313|EMBL:AJE06671.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_007_365G1_scaffold_452_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29888..30766)
DNA (879bp) protein (293aa)
Permease protein of ABC transporter system for sugars n=4 Tax=Bifidobacterium dentium RepID=D2Q7F4_BIFDB
ABC transporter permease
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28022.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_007_365G1_scaffold_452_22
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30773..31876)
DNA (1104bp) protein (368aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0QAB0_9BIFI
Sugar ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:KFI94098.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
sugar ABC transporter substrate-binding protein
L1_007_365G1_scaffold_452_23
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31977..33296)
DNA (1320bp) protein (440aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FD37_9BIFI
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEP21824.1}; Putative ABC transporter substrate binding component {ECO:0000313|EMBL:BAQ97177.1}; TaxID=518635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum DSM 20098 = JCM 7096.;"
sugars ABC transporter substrate-binding protein
L1_007_365G1_scaffold_452_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33532..34548)
DNA (1017bp) protein (339aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=D2Q7F7_BIFDB
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADB10719.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_007_365G1_scaffold_452_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34721..36973)
DNA (2253bp) protein (751aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BV51_9BIFI
Glycosyltransferase {ECO:0000313|EMBL:KEF28804.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
glycosyltransferase
L1_007_365G1_scaffold_452_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37220..38530
DNA (1311bp) protein (437aa)
Carbohydrate binding domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV52_9BIFI
Carbohydrate binding domain protein {ECO:0000313|EMBL:EEG70026.1}; Putative glycosyl hydrolase {ECO:0000313|EMBL:BAR04361.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Secreted glycosyl hydrolase
L1_007_365G1_scaffold_452_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38642..41098
DNA (2457bp) protein (819aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV53_9BIFI
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEG70027.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04362.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Sensory box/GGDEF family protein
L1_007_365G1_scaffold_452_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41231..42247
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUF1_9BIFI
LacI family transcriptional regulator {ECO:0000313|EMBL:KEF28807.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
LacI family transcriptional regulator
L1_007_365G1_scaffold_452_29
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42355..43686)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P503_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15809.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
N-acetylglucosamine-6-phosphate deacetylase
L1_007_365G1_scaffold_452_30
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43983..44795)
DNA (813bp) protein (271aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NXA3_9BIFI
glucosamine-6-phosphate deaminase
Displaying items 1-30 of 39 in total

View Taxonomy