ggKbase home page

L1_007_365G1_scaffold_462

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_462_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(324..638)
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ARP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68514.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Sel1 domain-containing protein repeat-containing protein
L1_007_365G1_scaffold_462_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(635..1060)
-----------------
DNA (426bp)
protein (142aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YW34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56409.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_365G1_scaffold_462_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1151..1450
-----------------
DNA (300bp)
protein (100aa)
Nucleotidyltransferase domain protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FDF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56408.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
DNA polymerase beta domain protein region
L1_007_365G1_scaffold_462_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1425..1784
-----------------
DNA (360bp)
protein (120aa)
Putative toxin-antitoxin system, antitoxin component (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BJN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56407.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_365G1_scaffold_462_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2151..2966)
-----------------
DNA (816bp)
protein (272aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56406.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_007_365G1_scaffold_462_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2963..3451)
-----------------
DNA (489bp)
protein (163aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO19207.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_462_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4001..4711)
-----------------
DNA (711bp)
protein (237aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20901.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_462_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4728..5663)
-----------------
DNA (936bp)
protein (312aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20902.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_462_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5660..6019)
-----------------
DNA (360bp)
protein (120aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CH89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52150.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_365G1_scaffold_462_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6286..6930)
-----------------
DNA (645bp)
protein (215aa)
Putative uncharacterized protein (Fragment) n=2 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CN49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56400.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_365G1_scaffold_462_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7517..8989)
-----------------
DNA (1473bp)
protein (491aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14 1.4.1.13)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YN59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56399.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_007_365G1_scaffold_462_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8992..13530)
-----------------
DNA (4539bp)
protein (1513aa)
gltB; glutamate synthase large subunit (EC:1.4.1.13)
Glutamate synthase [NADPH], large subunit n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YN58_9FIRM
Glutamate synthase [NADPH], large subunit {ECO:0000313|EMBL:EHM53636.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L1_007_365G1_scaffold_462_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13607..14149)
-----------------
DNA (543bp)
protein (181aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32048.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_462_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14183..15514)
-----------------
DNA (1332bp)
protein (444aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
glnA; glutamine synthetase I (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YN56_9FIRM
L1_007_365G1_scaffold_462_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15826..16107
-----------------
DNA (282bp)
protein (94aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRS4_9FIRM
L1_007_365G1_scaffold_462_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16169..16408
-----------------
DNA (240bp)
protein (80aa)
purF; putative amidophosphoribosyltransferase (EC:2.4.2.14)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32046.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_462_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16819..18402
-----------------
DNA (1584bp)
protein (528aa)
asnB; asparagine synthetase B (EC:6.3.5.4)
Asparagine synthetase n=2 Tax=Clostridiales RepID=H1CGD7_9FIRM
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EHO32045.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_462_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18448..20094
-----------------
DNA (1647bp)
protein (549aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YN50_9FIRM
L1_007_365G1_scaffold_462_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20351..21022
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YN48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53626.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
5'-nucleotidase
L1_007_365G1_scaffold_462_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21153..22070)
-----------------
DNA (918bp)
protein (306aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGD4_9FIRM
L1_007_365G1_scaffold_462_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22111..23289)
-----------------
DNA (1179bp)
protein (393aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGD3_9FIRM
L1_007_365G1_scaffold_462_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23302..24153)
-----------------
DNA (852bp)
protein (284aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGD2_9FIRM
L1_007_365G1_scaffold_462_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24195..25418)
-----------------
DNA (1224bp)
protein (408aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMG0_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L1_007_365G1_scaffold_462_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25415..26401)
-----------------
DNA (987bp)
protein (329aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGD0_9FIRM
hypothetical protein
L1_007_365G1_scaffold_462_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26394..27779)
-----------------
DNA (1386bp)
protein (462aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=3 Tax=Clostridiales RepID=G9YMG2_9FIRM
L1_007_365G1_scaffold_462_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27851..29065)
-----------------
DNA (1215bp)
protein (405aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=2 Tax=Clostridiales RepID=U2BMV6_9CLOT
L1_007_365G1_scaffold_462_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29338..29721)
-----------------
DNA (384bp)
protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CZC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72626.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type enterochelin transport system, periplasmic component
L1_007_365G1_scaffold_462_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30336..30551)
-----------------
DNA (216bp)
protein (72aa)
ABC-type enterochelin transport system, ATPase component (EC:3.6.3.34)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32032.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_462_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30618..31295)
-----------------
DNA (678bp)
protein (226aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YP10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM52982.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L1_007_365G1_scaffold_462_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31529..32116)
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YP08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM52979.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
Displaying items 1-30 of 49 in total

View Taxonomy