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L1_007_365G1_scaffold_483

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_483_1
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..289)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AWS2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28065.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycosyltransferase, family 2
L1_007_365G1_scaffold_483_2
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(351..1817)
-----------------
DNA (1467bp)
protein (489aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AW70_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28066.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L1_007_365G1_scaffold_483_3
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1931..3535)
-----------------
DNA (1605bp)
protein (535aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZM95_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28067.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
flippase
L1_007_365G1_scaffold_483_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4588..6159)
-----------------
DNA (1572bp)
protein (524aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BIZ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28068.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L1_007_365G1_scaffold_483_5
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6434..8344)
-----------------
DNA (1911bp)
protein (637aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AJ69_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28069.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
nucleotide-diphosphate sugar epimerase
L1_007_365G1_scaffold_483_6
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8364..8744)
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LII5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ85425.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L1_007_365G1_scaffold_483_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8784..9839)
-----------------
DNA (1056bp)
protein (352aa)
Putative transcriptional regulator UpxY-like protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LII4_PARD8
transcriptional regulator UpxY-like protein
Putative transcriptional regulator UpxY-like protein {ECO:0000313|EMBL:ABR45498.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L1_007_365G1_scaffold_483_8
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10347..11279)
-----------------
DNA (933bp)
protein (311aa)
Integrase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LII1_PARD8
integrase
Uncharacterized protein {ECO:0000313|EMBL:KEJ85423.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L1_007_365G1_scaffold_483_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11367..11756
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LII0_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45494.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L1_007_365G1_scaffold_483_10
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11770..11952
-----------------
DNA (183bp)
protein (61aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7X6E6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85421.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L1_007_365G1_scaffold_483_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12118..13452
-----------------
DNA (1335bp)
protein (445aa)
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=5 Tax=Bacteroidales RepID=A6LIH9_PARD8
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L1_007_365G1_scaffold_483_12
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13634..15064
-----------------
DNA (1431bp)
protein (477aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZYQ9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28076.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L1_007_365G1_scaffold_483_13
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15061..15798
-----------------
DNA (738bp)
protein (246aa)
Mannose-1-phosphate guanyltransferase n=9 Tax=Bacteroidales RepID=A6LIH7_PARD8
mannose-1-phosphate guanylyltransferase
Nucleotidyl transferase {ECO:0000313|EMBL:EFK64545.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L1_007_365G1_scaffold_483_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15814..16845
-----------------
DNA (1032bp)
protein (344aa)
Putative endonuclease/exonuclease/phosphatase family protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LIH6_PARD8
endonuclease/exonuclease/phosphatase
Putative endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:ABR45490.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L1_007_365G1_scaffold_483_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16926..19880)
-----------------
DNA (2955bp)
protein (985aa)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LIH5_PARD8
phosphoenolpyruvate synthase
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase {ECO:0000313|EMBL:ABR45489.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L1_007_365G1_scaffold_483_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20076..21410
-----------------
DNA (1335bp)
protein (445aa)
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Parabacteroides sp. D13 RepID=C7X6E0_9PORP
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L1_007_365G1_scaffold_483_17
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21509..22066)
-----------------
DNA (558bp)
protein (186aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=7 Tax=Bacteroidales RepID=C7X6D9_9PORP
L1_007_365G1_scaffold_483_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22063..22377)
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X6D8_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10784.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L1_007_365G1_scaffold_483_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22891..23352)
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LIH1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS75048.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L1_007_365G1_scaffold_483_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23415..24455)
-----------------
DNA (1041bp)
protein (347aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LIH0_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS75049.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L1_007_365G1_scaffold_483_21
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24488..25339)
-----------------
DNA (852bp)
protein (284aa)
Tat pathway signal sequence domain protein n=5 Tax=Bacteroidales RepID=C7X6D5_9PORP
AP endonuclease family 2 {ECO:0000313|EMBL:CDB48766.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L1_007_365G1_scaffold_483_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25374..27344)
-----------------
DNA (1971bp)
protein (657aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Parabacteroides RepID=C7X6D4_9PORP
two-component system sensor histidine kinase
L1_007_365G1_scaffold_483_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27530..30151)
-----------------
DNA (2622bp)
protein (874aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6ABG3_9PORP
L1_007_365G1_scaffold_483_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30519..31433
-----------------
DNA (915bp)
protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Pseudouridine synthase n=4 Tax=Parabacteroides RepID=A6LIG6_PARD8
RNA pseudouridylate synthase
L1_007_365G1_scaffold_483_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31455..33542
-----------------
DNA (2088bp)
protein (696aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5Z2D6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20912.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
thiol:disulfide interchange protein
L1_007_365G1_scaffold_483_26
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33611..34396
-----------------
DNA (786bp)
protein (262aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LIG4_PARD8
Uncharacterized protein {ECO:0000313|EMBL:EEY83157.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L1_007_365G1_scaffold_483_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34507..34980)
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LIG3_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK64521.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L1_007_365G1_scaffold_483_28
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35027..35419)
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LIG2_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10774.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L1_007_365G1_scaffold_483_29
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35467..36114)
-----------------
DNA (648bp)
protein (216aa)
RNA polymerase sigma-70 factor ECF subfamily n=3 Tax=Bacteroidales RepID=R6IQL8_9PORP
RNA polymerase sigma-70 factor ECF subfamily {ECO:0000313|EMBL:CDB48774.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
RNA polymerase ECF-type sigma factor
L1_007_365G1_scaffold_483_30
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36264..37904)
-----------------
DNA (1641bp)
protein (547aa)
60 kDa chaperonin n=11 Tax=Bacteria RepID=CH60_PARD8
groEL; chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Displaying items 1-30 of 44 in total

View Taxonomy