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L1_007_365G1_scaffold_484

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_484_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(35..217)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GE57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03658.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L1_007_365G1_scaffold_484_2
unknown

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450..539
DNA (90bp) protein (30aa)

This feature has no annotations

L1_007_365G1_scaffold_484_3
unknown

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502..714
DNA (213bp) protein (71aa)

This feature has no annotations

L1_007_365G1_scaffold_484_4
unknown

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792..1172
DNA (381bp) protein (127aa)

This feature has no annotations

L1_007_365G1_scaffold_484_5
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1513..2178
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HN70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14791.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
L1_007_365G1_scaffold_484_6
unknown

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comp(2495..2695)
DNA (201bp) protein (67aa)

This feature has no annotations

L1_007_365G1_scaffold_484_7
unknown

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2765..2983
DNA (219bp) protein (73aa)

This feature has no annotations

L1_007_365G1_scaffold_484_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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3284..5176
DNA (1893bp) protein (631aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33749.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L1_007_365G1_scaffold_484_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5207..6541
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZHK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45575.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
putative signaling protein
L1_007_365G1_scaffold_484_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6614..9331)
DNA (2718bp) protein (906aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43515.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_484_11
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9552..10202
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKG5_9CLOT
IMPACT family member YigZ {ECO:0000313|EMBL:KJJ68799.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
conserved hypothetical protein TIGR00257
L1_007_365G1_scaffold_484_12
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10335..12164
DNA (1830bp) protein (610aa)
GTP-binding protein TypA/BipA n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JJA9_9CLOT
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CDB62968.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
GTP-binding protein TypA/BipA
L1_007_365G1_scaffold_484_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12406..13035
DNA (630bp) protein (210aa)
Single-strand binding family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EU96_9FIRM
Single-strand binding family protein {ECO:0000313|EMBL:EEQ61590.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ssDNA-binding protein
L1_007_365G1_scaffold_484_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13181..13678
DNA (498bp) protein (166aa)
ATP:corrinoid adenosyltransferase (EC:2.5.1.17)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43520.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_484_15
unknown

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13765..13938
DNA (174bp) protein (58aa)

This feature has no annotations

L1_007_365G1_scaffold_484_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14050..14937
DNA (888bp) protein (296aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5HX39_9CLOT
dihydrodipicolinate synthase
L1_007_365G1_scaffold_484_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15009..15767
DNA (759bp) protein (253aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IT94_9CLOT
L1_007_365G1_scaffold_484_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15926..16276
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEQ61594.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_007_365G1_scaffold_484_19
unknown

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16469..16843
DNA (375bp) protein (125aa)

This feature has no annotations

L1_007_365G1_scaffold_484_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17035..18483
DNA (1449bp) protein (483aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Amidophosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3R0_9CLOT
amidophosphoribosyltransferase
L1_007_365G1_scaffold_484_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18549..19985
DNA (1437bp) protein (479aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
adenylosuccinate lyase (EC:4.3.2.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN22_9CLOT
L1_007_365G1_scaffold_484_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20191..21099
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IT96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43529.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transcriptional regulator
L1_007_365G1_scaffold_484_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21328..22605
DNA (1278bp) protein (426aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=7 Tax=Clostridium RepID=A8RUY2_9CLOT
L1_007_365G1_scaffold_484_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22683..22889)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3T4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43557.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_484_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22886..24820)
DNA (1935bp) protein (645aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XPZ7_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ17436.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC transporter
L1_007_365G1_scaffold_484_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24980..25639
DNA (660bp) protein (220aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUB0_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
CoA-binding protein
L1_007_365G1_scaffold_484_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25641..26030
DNA (390bp) protein (130aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phosphopantethiene--protein transferase domain (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5INC0_9CLOT
L1_007_365G1_scaffold_484_28
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26027..27685
DNA (1659bp) protein (553aa)
YjeF domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D102_9CLOT
YjeF domain protein {ECO:0000313|EMBL:EEG54988.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L1_007_365G1_scaffold_484_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27682..28872
DNA (1191bp) protein (397aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3T7_9CLOT
L1_007_365G1_scaffold_484_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28956..29339
DNA (384bp) protein (128aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
mRNA interferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN49_9CLOT
Growth inhibitor
Displaying items 1-30 of 52 in total

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