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L1_007_365G1_scaffold_497

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_497_1
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(103..2139)
-----------------
DNA (2037bp)
protein (679aa)
SusD family protein n=3 Tax=Bacteroides RepID=C6Z6G1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17419.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L1_007_365G1_scaffold_497_2
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2170..5580)
-----------------
DNA (3411bp)
protein (1137aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6Z6G2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17420.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
membrane protein
L1_007_365G1_scaffold_497_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5827..7848)
-----------------
DNA (2022bp)
protein (674aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HGE3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03077.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
glycoside hydrolase
L1_007_365G1_scaffold_497_4
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8252..10405)
-----------------
DNA (2154bp)
protein (718aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R9HG88_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS09890.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
glycan metabolism protein RagB
L1_007_365G1_scaffold_497_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10409..13639)
-----------------
DNA (3231bp)
protein (1077aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HGM7_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS03079.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
collagen-binding protein
L1_007_365G1_scaffold_497_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13858..14808)
-----------------
DNA (951bp)
protein (317aa)
Pectinesterase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8G8_BACVU
Pectinesterase {ECO:0000313|EMBL:EFG17855.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
carbohydrate esterase family 8 protein
L1_007_365G1_scaffold_497_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14823..16052)
-----------------
DNA (1230bp)
protein (410aa)
Glycosyl hydrolase, family 88 n=3 Tax=Bacteroides RepID=D4V8G9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY80676.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_365G1_scaffold_497_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16342..17733
-----------------
DNA (1392bp)
protein (464aa)
Phosphotransferase enzyme II n=6 Tax=Bacteroides RepID=E5UXX7_9BACE
phosphotransferase enzyme II, C component
Putative phosphotransferase enzyme II, C component {ECO:0000313|EMBL:ABR39472.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_365G1_scaffold_497_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17746..18708
-----------------
DNA (963bp)
protein (321aa)
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=3 Tax=Bacteroides RepID=A6L1A7_BACV8
L1_007_365G1_scaffold_497_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18929..20404
-----------------
DNA (1476bp)
protein (492aa)
Hexuronate transporter n=7 Tax=Bacteroides RepID=A6L1A6_BACV8
hexuronate transporter
Sugar (And other) transporter family protein {ECO:0000313|EMBL:KDS45500.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_365G1_scaffold_497_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20458..23784)
-----------------
DNA (3327bp)
protein (1109aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z6H1_9BACE
AAA domain protein {ECO:0000313|EMBL:KDS45501.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_365G1_scaffold_497_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23806..24546)
-----------------
DNA (741bp)
protein (247aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z6H2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET16481.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_007_365G1_scaffold_497_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24643..26106)
-----------------
DNA (1464bp)
protein (488aa)
Uncharacterized protein n=4 Tax=Bacteroides vulgatus RepID=A6L1A3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS03087.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_365G1_scaffold_497_14
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26176..27180)
-----------------
DNA (1005bp)
protein (335aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z6H4_9BACE
Glycoside hydrolase family 43 {ECO:0000313|EMBL:EFV66015.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
glycoside hydrolase
L1_007_365G1_scaffold_497_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27366..28802)
-----------------
DNA (1437bp)
protein (479aa)
Putative succinate-semialdehyde dehydrogenase [NAD(P)+] n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8H7_BACVU
Putative succinate-semialdehyde dehydrogenase [NAD(P)+] {ECO:0000313|EMBL:EFG17864.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
aldehyde dehydrogenase A
L1_007_365G1_scaffold_497_16
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29014..31803)
-----------------
DNA (2790bp)
protein (930aa)
Transcriptional regulator, AraC family n=2 Tax=Bacteroides RepID=C6Z6H6_9BACE
Two-component system response regulator {ECO:0000313|EMBL:EFV66013.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
two-component system response regulator
L1_007_365G1_scaffold_497_17
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32013..33389)
-----------------
DNA (1377bp)
protein (459aa)
Glycoside hydrolase family 28, candidate polygalacturonase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWR7_BACV8
polygalacturonase
Polygalacturonase {ECO:0000313|EMBL:AII65183.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L1_007_365G1_scaffold_497_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33496..34818)
-----------------
DNA (1323bp)
protein (441aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HH48_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03111.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
glycosyl hydrolase family 43
L1_007_365G1_scaffold_497_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34927..37374)
-----------------
DNA (2448bp)
protein (816aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6Z6H8_9BACE
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EET16487.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
beta-galactosidase
L1_007_365G1_scaffold_497_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37622..39673)
-----------------
DNA (2052bp)
protein (684aa)
Outer membrane protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UXW6_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS26661.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
starch-binding protein
L1_007_365G1_scaffold_497_21
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39687..43235)
-----------------
DNA (3549bp)
protein (1183aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=C6Z6I0_9BACE
TonB-dependent Receptor Plug domain-containing protein {ECO:0000313|EMBL:EFV66009.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
membrane protein
L1_007_365G1_scaffold_497_22
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43389..44333)
-----------------
DNA (945bp)
protein (315aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides RepID=C6Z6I1_9BACE
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EET16490.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
anti-sigma factor
L1_007_365G1_scaffold_497_23
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44452..45039)
-----------------
DNA (588bp)
protein (196aa)
RNA polymerase sigma-70 factor n=2 Tax=Bacteroides RepID=C6Z6I2_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EET16491.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
RNA polymerase
L1_007_365G1_scaffold_497_24
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45121..45402)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1UMI8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66006.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L1_007_365G1_scaffold_497_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45527..46924)
-----------------
DNA (1398bp)
protein (466aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9UDZ0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY80696.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_365G1_scaffold_497_26
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47253..47933
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L188_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66004.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_007_365G1_scaffold_497_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48126..48767)
-----------------
DNA (642bp)
protein (214aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UEW2_BACVU
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY80698.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
RNA polymerase ECF-type sigma factor
L1_007_365G1_scaffold_497_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48836..49849
-----------------
DNA (1014bp)
protein (338aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroides RepID=C6Z6I6_9BACE
anti-sigma factor
FecR family protein {ECO:0000313|EMBL:KDS45512.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_365G1_scaffold_497_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50103..52289
-----------------
DNA (2187bp)
protein (729aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZYW7_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY80700.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
Displaying 29 items

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