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L1_007_365G1_scaffold_507

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_507_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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92..637
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78954.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
GCN5 family acetyltransferase
L1_007_365G1_scaffold_507_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

717..1001
DNA (285bp) protein (95aa)
Transcriptional regulator ArsR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKZ7_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CCZ78953.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator (ArsR family)
L1_007_365G1_scaffold_507_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

985..1623
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78952.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted integral membrane protein
L1_007_365G1_scaffold_507_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1861..3180)
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V671_9FIRM
BaeS; signal transduction histidine kinase
L1_007_365G1_scaffold_507_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3173..3874)
DNA (702bp) protein (234aa)
Response regulator consisting of a CheY-like receiver domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULN5_9FIRM
Response regulator consisting of a CheY-like receiver domain {ECO:0000313|EMBL:CCZ78950.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
OmpR; response regulator consisting of a CheY-like receiver domain
L1_007_365G1_scaffold_507_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4053..4790
DNA (738bp) protein (246aa)
Peptidase C39 family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTC5_9FIRM
Peptidase C39 family {ECO:0000313|EMBL:CCZ78949.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Peptidase C39 family.
L1_007_365G1_scaffold_507_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4898..5812)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78948.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_507_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5829..7061)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78947.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted ATPase (AAA+ superfamily)
L1_007_365G1_scaffold_507_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7156..7311)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V665_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78946.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_507_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7308..7778)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78945.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Acetyltransferases
L1_007_365G1_scaffold_507_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7850..8158)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43614.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_507_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8339..9028
DNA (690bp) protein (230aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
DNA-3-methyladenine glycosylase II n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTB8_9FIRM
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:CCZ78944.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_507_13
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9361..9750)
DNA (390bp) protein (130aa)
Transposase, Mutator family n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SY12_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58269.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
transposase mutator type
L1_007_365G1_scaffold_507_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9831..10598)
DNA (768bp) protein (256aa)
Methyltransferase domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z571_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CDD35996.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_007_365G1_scaffold_507_15
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10695..11600)
DNA (906bp) protein (302aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B7A1E2
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:CCY61426.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
dTDP-glucose 4,6-dehydratase
L1_007_365G1_scaffold_507_16
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11614..13308)
DNA (1695bp) protein (565aa)
Putative benzoyl-CoA reductase, subunit A n=2 Tax=Coprococcus RepID=C0B7Q7_9FIRM
Putative benzoyl-CoA reductase subunit A {ECO:0000313|EMBL:CDB84605.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
CoA-substrate-specific enzyme activase, putative
L1_007_365G1_scaffold_507_17
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13289..14575)
DNA (1287bp) protein (429aa)
2-hydroxyglutaryl-CoA dehydratase, D-component n=1 Tax=Blautia sp. KLE 1732 RepID=U2EUM6_9FIRM
2-hydroxyglutaryl-CoA dehydratase, D-component {ECO:0000313|EMBL:ERI96761.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L1_007_365G1_scaffold_507_18
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14830..14988)
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T3W0_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97247.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_507_19
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15176..16762
DNA (1587bp) protein (529aa)
protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YB87_9FIRM
Putative serine/threonine protein kinase {ECO:0000313|EMBL:CDA24818.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_007_365G1_scaffold_507_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16875..17285
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z7P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24817.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
helix-turn-helix domain protein
L1_007_365G1_scaffold_507_21
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17382..20516)
DNA (3135bp) protein (1045aa)
Putative listeria/Bacterioides repeat-containing domain protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YTN1_9FIRM
Putative listeria/Bacterioides repeat-containing domain protein {ECO:0000313|EMBL:CDA24816.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
nucleic acid binding OB-fold tRNA/helicase-type
L1_007_365G1_scaffold_507_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20756..21940)
DNA (1185bp) protein (395aa)
Probable hydroxymethylpyrimidine transporter CytX n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM17_9FIRM
Probable hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:CCZ79075.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
probable hydroxymethylpyrimidine transporter CytX
L1_007_365G1_scaffold_507_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21937..22737)
DNA (801bp) protein (267aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CBL11709.1}; EC=2.7.4.7 {ECO:0000313|EMBL:CBL11709.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Phosphomethylpyrimidine kinase n=2 Tax=Roseburia RepID=D4KWG9_9FIRM
L1_007_365G1_scaffold_507_24
unknown

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comp(23131..24804)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P4S7_9CLOT
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
Uncharacterized protein {ECO:0000313|EMBL:CBL39043.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_365G1_scaffold_507_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24927..25226)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36537.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L1_007_365G1_scaffold_507_26
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25533..26537)
DNA (1005bp) protein (335aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Arabinogalactan endo-1 4-beta-galactosidase n=1 Tax=Blautia sp. CAG:37 RepID=R7JQ65_9FIRM
diguanylate cyclase (GGDEF) domain
L1_007_365G1_scaffold_507_27
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26553..27602)
DNA (1050bp) protein (350aa)
arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; Flags: Precursor;; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
Arabinogalactan endo-1,4-beta-galactosidase n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CZ52_PAESJ
L1_007_365G1_scaffold_507_28
Treponema succinifaciens, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(27618..30464)
DNA (2847bp) protein (949aa)
arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=869209 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091).;"
Arabinogalactan endo-1,4-beta-galactosidase n=1 Tax=Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) RepID=F2NSS9_TRES6
L1_007_365G1_scaffold_507_29
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30466..31479)
DNA (1014bp) protein (338aa)
transcriptional regulator, LacI family (EC:5.1.1.1)
Transcriptional regulator LacI family n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L891_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDB79739.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L1_007_365G1_scaffold_507_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31507..33108)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42595.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sugar ABC transporter substrate-binding protein
Displaying items 1-30 of 48 in total

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