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L1_007_365G1_scaffold_551

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_551_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..358
DNA (357bp) protein (119aa)
30S ribosomal protein S1 n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U9V5_9BACE
30S ribosomal protein S1 {ECO:0000313|EMBL:CCZ72404.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
rpsA; 30S ribosomal protein S1
L1_007_365G1_scaffold_551_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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552..1490
DNA (939bp) protein (313aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2S9_9BACE
L1_007_365G1_scaffold_551_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1507..3024
DNA (1518bp) protein (506aa)
Conserved domain protein n=3 Tax=Bacteroides RepID=A5ZGD7_9BACE
Conserved domain protein {ECO:0000313|EMBL:EDM21247.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_007_365G1_scaffold_551_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3052..3603
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=2 Tax=Bacteroides RepID=A5ZGD8_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:CCZ72401.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase ECF-type sigma factor
L1_007_365G1_scaffold_551_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3621..4031
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72400.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_365G1_scaffold_551_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4059..4523
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V804_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72399.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_365G1_scaffold_551_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4633..5421)
DNA (789bp) protein (263aa)
MazG family protein (EC:3.6.1.19)
MazG family protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2S5_9BACE
MazG family protein {ECO:0000313|EMBL:CCZ72398.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_007_365G1_scaffold_551_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5494..6537)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UUK8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72397.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_365G1_scaffold_551_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6687..7325
DNA (639bp) protein (213aa)
Uncharacterized protein n=3 Tax=root RepID=A5ZGE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21254.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_007_365G1_scaffold_551_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


7389..10025
DNA (2637bp) protein (879aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=2 Tax=root RepID=A5ZGE5_9BACE
L1_007_365G1_scaffold_551_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10142..12037
DNA (1896bp) protein (632aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides caccae RepID=A5ZGE6_9BACE
two-component system sensor histidine kinase
L1_007_365G1_scaffold_551_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12046..12621)
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor n=3 Tax=Bacteroides RepID=A5ZGE7_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ72392.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L1_007_365G1_scaffold_551_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12757..13773
DNA (1017bp) protein (339aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides RepID=A5ZGE8_9BACE
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDM21258.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Fe2+-dicitrate sensor, membrane component
L1_007_365G1_scaffold_551_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14025..17336
DNA (3312bp) protein (1104aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q166_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY22578.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
frrG; putative outer membrane protein
L1_007_365G1_scaffold_551_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17343..18863
DNA (1521bp) protein (507aa)
SusD family protein n=3 Tax=Bacteroides RepID=A5ZGF0_9BACE
SusD family protein {ECO:0000313|EMBL:EDM21260.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
frrH; putative outer membrane protein
L1_007_365G1_scaffold_551_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18878..20188
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V814_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22580.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_007_365G1_scaffold_551_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20217..21782
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGF2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21262.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_007_365G1_scaffold_551_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22028..24355
DNA (2328bp) protein (776aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBB4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22582.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
beta-galactosidase
L1_007_365G1_scaffold_551_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24425..26548
DNA (2124bp) protein (708aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q173_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22583.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alpha-N-acetylglucosaminidase
L1_007_365G1_scaffold_551_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27081..28136)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EQH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22584.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative endonuclease/exonuclease/phosphatase family protein
L1_007_365G1_scaffold_551_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28148..29698)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V819_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22585.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_007_365G1_scaffold_551_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29712..32873)
DNA (3162bp) protein (1054aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0I2_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY22586.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative outer membrane protein probably involved in nutrient binding
L1_007_365G1_scaffold_551_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33166..34407)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBB8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22587.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
glycoside hydrolase family protein
L1_007_365G1_scaffold_551_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34533..38570)
DNA (4038bp) protein (1346aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q179_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22588.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system sensor histidine kinase/response regulator
L1_007_365G1_scaffold_551_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38581..39027)
DNA (447bp) protein (149aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGF6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72382.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_365G1_scaffold_551_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39089..40195)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGF7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72381.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_365G1_scaffold_551_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40500..43817)
DNA (3318bp) protein (1106aa)
Protein translocase subunit SecA n=2 Tax=Bacteroides RepID=I9Q0I6_9BACE
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
protein translocase subunit secA
L1_007_365G1_scaffold_551_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43923..45497)
DNA (1575bp) protein (525aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZKW4_9BACE
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:EDM19241.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Type I phosphodiesterase / nucleotide pyrophosphatase.
L1_007_365G1_scaffold_551_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45497..46684)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UNE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72651.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_365G1_scaffold_551_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47107..47751
DNA (645bp) protein (215aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
pantothenate kinase, type III (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EQI2_9BACE
Displaying 30 items

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