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L1_007_365G1_scaffold_554

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_554_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..133)
DNA (132bp) protein (44aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N5R9_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDS18437.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcriptional regulator, TetR family
L1_007_365G1_scaffold_554_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

297..1277
DNA (981bp) protein (327aa)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EDS18438.1}; EC=1.4.1.16 {ECO:0000313|EMBL:EDS18438.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=3 Tax=Erysipelotrichaceae RepID=B0N5S0_9FIRM
L1_007_365G1_scaffold_554_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1415..1609)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N5S1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31861.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_554_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2109..2330)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RFW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31862.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative ABC transport system containing duplicated ATPase domain
L1_007_365G1_scaffold_554_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2355..2597)
DNA (243bp) protein (81aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N5S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91257.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_007_365G1_scaffold_554_6
unknown

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comp(2919..3134)
DNA (216bp) protein (72aa)

This feature has no annotations

L1_007_365G1_scaffold_554_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3150..4508
DNA (1359bp) protein (453aa)
MATE efflux family protein n=4 Tax=Coprobacillus RepID=C3RRC2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHQ46923.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_554_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4607..5641
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RRC1_9FIRM
DNA-binding protein {ECO:0000313|EMBL:CCZ31865.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
DNA-binding protein
L1_007_365G1_scaffold_554_9
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5768..6253
DNA (486bp) protein (162aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N5S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18444.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_007_365G1_scaffold_554_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6945..7718
DNA (774bp) protein (258aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N5S7_9FIRM
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDS18445.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcriptional regulator, RpiR family
L1_007_365G1_scaffold_554_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7787..8650
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N5S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18446.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L1_007_365G1_scaffold_554_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8794..11355
DNA (2562bp) protein (854aa)
Small GTP-binding protein domain n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R6Y4_9FIRM
Small GTP-binding protein domain {ECO:0000313|EMBL:EHM88248.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
small GTP-binding protein domain protein
L1_007_365G1_scaffold_554_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11366..11749
DNA (384bp) protein (128aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N5T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32465.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_554_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11841..12266
DNA (426bp) protein (142aa)
Transcriptional regulator, MarR family n=5 Tax=Erysipelotrichaceae RepID=B0N5T1_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ32466.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Transcriptional regulators
L1_007_365G1_scaffold_554_15
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12268..13986
DNA (1719bp) protein (573aa)
ABC transporter, ATP-binding protein n=4 Tax=Erysipelotrichaceae RepID=B0N5T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM88251.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
ABC transporter
L1_007_365G1_scaffold_554_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13988..15844
DNA (1857bp) protein (619aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RQG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46943.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_365G1_scaffold_554_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15948..17378
DNA (1431bp) protein (477aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=C3RQG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46944.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
lipoprotein
L1_007_365G1_scaffold_554_18
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17400..20372
DNA (2973bp) protein (991aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AKY6_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHQ46945.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
putative diguanylate kinase signaling protein
L1_007_365G1_scaffold_554_19
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20479..22809)
DNA (2331bp) protein (777aa)
E1-E2 ATPase n=2 Tax=Erysipelotrichaceae RepID=B0N5T6_9FIRM
HAD ATPase, P-type, family IC {ECO:0000313|EMBL:EHM88256.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
P-type ATPase
L1_007_365G1_scaffold_554_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23051..23194)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R6Z3_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCZ32527.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Predicted xylanase/chitin deacetylase
L1_007_365G1_scaffold_554_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23191..24537)
DNA (1347bp) protein (449aa)
Polysaccharide deacetylase n=4 Tax=Erysipelotrichaceae RepID=B0N5T7_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EDS18455.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Predicted xylanase/chitin deacetylase
L1_007_365G1_scaffold_554_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24598..25821
DNA (1224bp) protein (408aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N5T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32528.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Protein of unknown function (DUF2974).
L1_007_365G1_scaffold_554_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25875..26279
DNA (405bp) protein (135aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RQH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32529.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Zn-finger containing protein
L1_007_365G1_scaffold_554_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26290..26745)
DNA (456bp) protein (152aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N5U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46950.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_554_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26845..27363
DNA (519bp) protein (173aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RQH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM88262.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_365G1_scaffold_554_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27426..28739)
DNA (1314bp) protein (438aa)
Amidohydrolase n=3 Tax=Erysipelotrichaceae RepID=B0N5U2_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EHQ46952.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
amidohydrolase
L1_007_365G1_scaffold_554_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28815..31178)
DNA (2364bp) protein (788aa)
HAD ATPase, P-type, family IC n=2 Tax=Coprobacillus RepID=C3RQI3_9FIRM
E1-E2 ATPase {ECO:0000313|EMBL:EDS18461.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
HAD ATPase, P-type, family IC
L1_007_365G1_scaffold_554_28
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31391..32731
DNA (1341bp) protein (447aa)
Citrate synthase n=4 Tax=Erysipelotrichaceae RepID=B0N5U4_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Citrate synthase
L1_007_365G1_scaffold_554_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32790..33854)
DNA (1065bp) protein (355aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EDS18463.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EDS18463.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=4 Tax=Erysipelotrichaceae RepID=B0N5U5_9FIRM
L1_007_365G1_scaffold_554_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

34097..34507
DNA (411bp) protein (137aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RQI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46956.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
phosphotransferase system cellobiose-specific component IIB
Displaying items 1-30 of 44 in total

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