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L1_007_365G1_scaffold_562

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_562_1
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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221..619
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE72_9FIRM
Bacterial mobilisation protein (MobC).
Uncharacterized protein {ECO:0000313|EMBL:EFY05107.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
L1_007_365G1_scaffold_562_2
Megasphaera genomosp. type_1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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591..2135
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI00036D130B
Uncharacterized protein {ECO:0000313|EMBL:EFD93361.1}; TaxID=699218 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera genomosp. type_1 str. 28L.;"
hypothetical protein
L1_007_365G1_scaffold_562_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2125..2511
DNA (387bp) protein (129aa)
Uncharacterized protein n=9 Tax=Clostridiales RepID=C0BE70_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHL67731.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_365G1_scaffold_562_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2527..3378
DNA (852bp) protein (284aa)
Replication initiator protein A (RepA) N-terminus n=14 Tax=Firmicutes RepID=D4JSL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67730.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Replication initiator protein A (RepA) N-terminus.
L1_007_365G1_scaffold_562_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3375..4217
DNA (843bp) protein (281aa)
Phage DNA replication protein (Predicted replicative helicase loader) n=12 Tax=Firmicutes RepID=D4K3L4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHL67729.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_365G1_scaffold_562_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4232..4426
DNA (195bp) protein (65aa)
Uncharacterized protein n=13 Tax=Firmicutes RepID=C0BE67_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHL67728.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_365G1_scaffold_562_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4491..4691)
DNA (201bp) protein (67aa)
ATP-dependent exoDNAse beta subunit n=11 Tax=Firmicutes RepID=F7V2J9_CLOSS
RecB; ATP-dependent exoDNAse subunit beta
Uncharacterized protein {ECO:0000313|EMBL:EHL67727.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_365G1_scaffold_562_8
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4917..6488
DNA (1572bp) protein (524aa)
Site-specific recombinases, DNA invertase Pin homologs n=12 Tax=Firmicutes RepID=D6DFI4_CLOSC
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEG88142.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L1_007_365G1_scaffold_562_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6664..7527
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48249.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_007_365G1_scaffold_562_10
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7575..8012
DNA (438bp) protein (146aa)
SpoVG n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LD89_9FIRM
SpoVG {ECO:0000313|EMBL:EET61323.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Uncharacterized protein, involved in the regulation of septum location
L1_007_365G1_scaffold_562_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8012..8569
DNA (558bp) protein (186aa)
Transcriptional activator, adenine-specific DNA methyltransferase (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48251.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L1_007_365G1_scaffold_562_12

Not on your lists

8570..9304
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1ULM6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC78995.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_365G1_scaffold_562_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9677..12157
DNA (2481bp) protein (827aa)
conjugal transfer protein TraE n=1 Tax=Blautia producta RepID=UPI0003682DD5
Uncharacterized protein {ECO:0000313|EMBL:EGN48252.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
traE protein
L1_007_365G1_scaffold_562_14
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12186..14642
DNA (2457bp) protein (819aa)
peptidase M23 n=1 Tax=Blautia producta RepID=UPI0003798F51
Peptidase, M23 family {ECO:0000313|EMBL:EET61327.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Membrane proteins related to metalloendopeptidases
L1_007_365G1_scaffold_562_15
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14667..14912
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A620_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ23671.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L1_007_365G1_scaffold_562_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14902..16035
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48255.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_007_365G1_scaffold_562_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16072..20928
DNA (4857bp) protein (1619aa)
SrtB family sortase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2E4_9FIRM
SrtB family sortase {ECO:0000313|EMBL:EGN48256.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sortase, SrtB family
L1_007_365G1_scaffold_562_18
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20991..21473
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LD97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61331.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_007_365G1_scaffold_562_19
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21484..21810
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QL00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41953.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_007_365G1_scaffold_562_20
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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21857..22564
DNA (708bp) protein (236aa)
thymidylate synthase (FAD) (EC:2.1.1.148)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A4I0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81610.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L1_007_365G1_scaffold_562_21
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22561..22974
DNA (414bp) protein (138aa)
DUTP diphosphatase {ECO:0000313|EMBL:EET61334.1}; EC=3.6.1.23 {ECO:0000313|EMBL:EET61334.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
dUTPase (EC:3.6.1.23)
DUTP diphosphatase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDA0_9FIRM
L1_007_365G1_scaffold_562_22
unknown

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22984..23115
DNA (132bp) protein (44aa)

This feature has no annotations

L1_007_365G1_scaffold_562_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23112..25211
DNA (2100bp) protein (700aa)
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase III n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2F3_9FIRM
L1_007_365G1_scaffold_562_24
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25208..26026
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000378C999
Uncharacterized protein {ECO:0000313|EMBL:EET61343.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_007_365G1_scaffold_562_25
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26023..26661
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000367CAEF
Uncharacterized protein {ECO:0000313|EMBL:EMZ23684.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L1_007_365G1_scaffold_562_26
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26675..27289
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZQR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ19342.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L1_007_365G1_scaffold_562_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27243..27992
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48270.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_007_365G1_scaffold_562_28
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27989..28327
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61347.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_007_365G1_scaffold_562_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28411..28701
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48272.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_007_365G1_scaffold_562_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28971..29735
DNA (765bp) protein (255aa)
Predicted transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1G0_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL00109.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 51 in total

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