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L1_007_365G1_scaffold_568

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_568_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..185
-----------------
DNA (183bp)
protein (61aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRP7_9BACT
L1_007_365G1_scaffold_568_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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831..1058
-----------------
DNA (228bp)
protein (76aa)
Helix-turn-helix protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UHR9_9BACT
Helix-turn-helix protein {ECO:0000313|EMBL:CCZ75264.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Helix-turn-helix protein
L1_007_365G1_scaffold_568_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1068..2021
-----------------
DNA (954bp)
protein (318aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XKZ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24313.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_568_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2193..4922
-----------------
DNA (2730bp)
protein (910aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
pyruvate phosphate dikinase n=1 Tax=Alistipes onderdonkii RepID=UPI000375496F
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDD24312.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_007_365G1_scaffold_568_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5111..5599
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00038041F6
Uncharacterized protein {ECO:0000313|EMBL:CDD24311.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_568_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5902..6432
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24310.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_568_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6726..7271)
-----------------
DNA (546bp)
protein (182aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Peptide deformylase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ30_9BACT
peptide deformylase
L1_007_365G1_scaffold_568_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7268..7681)
-----------------
DNA (414bp)
protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Putative Holliday junction resolvase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XKZ4_9BACT
RNAse H-fold protein YqgF
L1_007_365G1_scaffold_568_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7685..7846)
-----------------
DNA (162bp)
protein (54aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1G2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24307.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_007_365G1_scaffold_568_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7857..9401)
-----------------
DNA (1545bp)
protein (515aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
glycyl-tRNA synthetease n=1 Tax=Alistipes onderdonkii RepID=UPI00036CB021
L1_007_365G1_scaffold_568_11
unknown

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9603..9815
-----------------
DNA (213bp)
protein (71aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037253A4
L1_007_365G1_scaffold_568_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9818..10450)
-----------------
DNA (633bp)
protein (211aa)
DNA repair protein RadC n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRN8_9BACT
DNA repair protein RadC {ECO:0000313|EMBL:CDD24305.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
DNA repair protein radc
L1_007_365G1_scaffold_568_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10598..11371)
-----------------
DNA (774bp)
protein (258aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ27_9BACT
L1_007_365G1_scaffold_568_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11394..12641)
-----------------
DNA (1248bp)
protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
3-oxoacyl-ACP synthase n=1 Tax=Alistipes onderdonkii RepID=UPI000378EE4A
beta-ketoacyl-acyl-carrier-protein synthase II
L1_007_365G1_scaffold_568_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12684..12920)
-----------------
DNA (237bp)
protein (79aa)
Acyl carrier protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1F8_9BACT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acyl carrier protein
L1_007_365G1_scaffold_568_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13099..13800
-----------------
DNA (702bp)
protein (234aa)
Peptidase E n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6L4_9BACT
Peptidase E {ECO:0000313|EMBL:CDD24301.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
peptidase E
L1_007_365G1_scaffold_568_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13854..14696
-----------------
DNA (843bp)
protein (281aa)
Prephenate dehydrogenase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRN3_9BACT
Prephenate dehydrogenase {ECO:0000313|EMBL:CDD24300.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
prephenate dehydrogenase
L1_007_365G1_scaffold_568_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14702..15067
-----------------
DNA (366bp)
protein (122aa)
UPF0102 protein BN590_01358 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ22_9BACT
UPF0102 protein BN590_01358 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
endonuclease
L1_007_365G1_scaffold_568_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15201..16427
-----------------
DNA (1227bp)
protein (409aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XKY5_9BACT
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:CDD24298.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
3-deoxy-D-manno-octulosonic-acid transferase
L1_007_365G1_scaffold_568_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16599..17879)
-----------------
DNA (1281bp)
protein (427aa)
Histidine acid phosphatase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1F4_9BACT
Histidine acid phosphatase {ECO:0000313|EMBL:CDD24297.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Histidine acid phosphatase
L1_007_365G1_scaffold_568_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17882..19168)
-----------------
DNA (1287bp)
protein (429aa)
UPF0597 protein BN590_01355 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6K9_9BACT
UPF0597 protein BN590_01355 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_568_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19242..19799
-----------------
DNA (558bp)
protein (186aa)
NTP pyrophosphohydrolase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRM8_9BACT
NTP pyrophosphohydrolase {ECO:0000313|EMBL:CDD24295.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
NTP pyrophosphohydrolase
L1_007_365G1_scaffold_568_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19933..20604
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ17_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24294.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_568_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20789..21469)
-----------------
DNA (681bp)
protein (227aa)
Nitroreductase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XKY1_9BACT
Nitroreductase {ECO:0000313|EMBL:CDD24293.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
nitroreductase
L1_007_365G1_scaffold_568_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21564..22643
-----------------
DNA (1080bp)
protein (360aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1E6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24292.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_568_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22657..23310
-----------------
DNA (654bp)
protein (218aa)
Acetyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6K3_9BACT
Acetyltransferase {ECO:0000313|EMBL:CDD24291.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acetyltransferase
L1_007_365G1_scaffold_568_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23477..24658)
-----------------
DNA (1182bp)
protein (394aa)
Transglutaminase-like protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRM5_9BACT
Transglutaminase-like protein {ECO:0000313|EMBL:CDD24290.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transglutaminase
L1_007_365G1_scaffold_568_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24655..25389)
-----------------
DNA (735bp)
protein (245aa)
copper homeostasis protein CutC n=1 Tax=Alistipes onderdonkii RepID=UPI00037BAB8E
Putative copper homeostasis protein CutC {ECO:0000313|EMBL:CDD24289.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_568_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25522..26103)
-----------------
DNA (582bp)
protein (194aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000380EA29
Uncharacterized protein {ECO:0000313|EMBL:CDD24288.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_568_30
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26096..27487)
-----------------
DNA (1392bp)
protein (464aa)
4Fe-4S ferredoxin n=1 Tax=Alistipes onderdonkii RepID=UPI000367B8ED
Putative iron-sulfur cluster-binding protein {ECO:0000313|EMBL:CDC99415.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
electron transport protein
Displaying items 1-30 of 42 in total

View Taxonomy