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L1_007_365G1_scaffold_574

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_574_31
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28176..28709)
DNA (534bp) protein (178aa)
DNA-binding helix-turn-helix protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7Y4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ79516.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Helix-turn-helix.
L1_007_365G1_scaffold_574_32
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(28702..28989)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BLK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66018.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L1_007_365G1_scaffold_574_33
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29162..29677
DNA (516bp) protein (172aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=unclassified Lachnospiraceae RepID=R9JR72_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS33672.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
RNA polymerase subunit sigma
L1_007_365G1_scaffold_574_34
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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29661..30272
DNA (612bp) protein (204aa)
Uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=R9JHT2_9FIRM
Putative zinc-finger {ECO:0000313|EMBL:KEF39643.1}; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans MEV2011.;"
hypothetical protein
L1_007_365G1_scaffold_574_35
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30420..30641)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YE31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25773.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_007_365G1_scaffold_574_36
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31040..31690)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79518.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_574_37
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31738..32583)
DNA (846bp) protein (282aa)
Probable lipase/esterase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWJ4_9FIRM
Probable lipase/esterase {ECO:0000313|EMBL:CDA25891.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative lipase/esterase
L1_007_365G1_scaffold_574_38
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32686..34776)
DNA (2091bp) protein (697aa)
Putative cache domain protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VIZ6_9FIRM
Putative cache domain protein {ECO:0000313|EMBL:CDC92226.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Methyl-accepting chemotaxis protein
L1_007_365G1_scaffold_574_39
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34921..36138)
DNA (1218bp) protein (406aa)
Acetyltransferase GNAT family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN97_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCZ79520.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_574_40
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(36196..36504)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y7N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12433.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L1_007_365G1_scaffold_574_41
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36669..37691)
DNA (1023bp) protein (341aa)
Bacterial Ig-like domain (Group 2) n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7Y9_9FIRM
Bacterial Ig-like domain (Group 2) {ECO:0000313|EMBL:CCZ79521.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Bacterial Ig-like domain (group 2).
L1_007_365G1_scaffold_574_42
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37782..39479)
DNA (1698bp) protein (566aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VKX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV16524.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L1_007_365G1_scaffold_574_43
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40036..40557
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79149.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_574_44
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40437..40724)
DNA (288bp) protein (96aa)
Global regulator protein family n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULG7_9FIRM
Global regulator protein family {ECO:0000313|EMBL:CCZ79148.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Global regulator protein family.
L1_007_365G1_scaffold_574_45
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40871..41449
DNA (579bp) protein (193aa)
Site-specific recombinase XerD n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULX0_9FIRM
Site-specific recombinase XerD {ECO:0000313|EMBL:CCZ79005.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_574_46
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41808..42665
DNA (858bp) protein (286aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEJ2_9FIRM
L1_007_365G1_scaffold_574_47
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42713..43228)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79146.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_574_48
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43344..44009)
DNA (666bp) protein (222aa)
ABC-2 type transport system ATP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM67_9FIRM
ABC-2 type transport system ATP-binding protein {ECO:0000313|EMBL:CCZ79145.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_574_49
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44011..44382)
DNA (372bp) protein (124aa)
GntR family transcriptional regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTW4_9FIRM
GntR family transcriptional regulator {ECO:0000313|EMBL:CCZ79144.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
GntR family transcriptional regulator
L1_007_365G1_scaffold_574_50
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44370..45071)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79143.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_574_51
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45049..45918)
DNA (870bp) protein (290aa)
ABC-2 type transport system ATP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEI6_9FIRM
ABC-2 type transport system ATP-binding protein {ECO:0000313|EMBL:CCZ79142.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_574_52
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46726..47073)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KQG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48709.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L1_007_365G1_scaffold_574_53
unknown

Not on your lists

comp(47113..47214)
DNA (102bp) protein (34aa)

This feature has no annotations

L1_007_365G1_scaffold_574_54
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47214..47516)
DNA (303bp) protein (101aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUH2_9FIRM
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EEG93731.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
addiction module antitoxin, RelB/DinJ family
L1_007_365G1_scaffold_574_55
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47571..48569)
DNA (999bp) protein (333aa)
Site-specific recombinase, phage integrase family n=2 Tax=root RepID=A8SQK3_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDP26994.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
phage integrase family protein
L1_007_365G1_scaffold_574_56
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48599..49042)
DNA (444bp) protein (148aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sp. L2-50 RepID=A7VIE2_9CLOT
GNAT family acetyltransferase {ECO:0000313|EMBL:KEF28397.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Predicted P-loop ATPase fused to an acetyltransferase
L1_007_365G1_scaffold_574_57
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49146..49730)
DNA (585bp) protein (195aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G920_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV01671.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
Displaying items 31-57 of 57 in total

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