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L1_007_365G1_scaffold_574

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_574_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

103..621
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V432_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78196.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_574_2
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(709..1155)
DNA (447bp) protein (149aa)
Accessory regulator B n=1 Tax=Clostridium sp. ASF502 RepID=N2AFQ4_9CLOT
Accessory regulator B {ECO:0000313|EMBL:EMZ25000.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
L1_007_365G1_scaffold_574_3
unknown

Not on your lists

comp(1155..1259)
DNA (105bp) protein (35aa)

This feature has no annotations

L1_007_365G1_scaffold_574_4
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1262..1420)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75864.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Protein of unknown function (DUF1016).
L1_007_365G1_scaffold_574_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(1524..2747)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ESQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99841.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_007_365G1_scaffold_574_6
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(2744..3622)
DNA (879bp) protein (293aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EIU9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA99840.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC-type multidrug transport system, ATPase component
L1_007_365G1_scaffold_574_7
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(3603..4364)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ERP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99839.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_007_365G1_scaffold_574_8
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(4333..4887)
DNA (555bp) protein (185aa)
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EGV3_9FIRM
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog {ECO:0000313|EMBL:CDA99838.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L1_007_365G1_scaffold_574_9
unknown

Not on your lists

comp(5251..5370)
DNA (120bp) protein (40aa)

This feature has no annotations

L1_007_365G1_scaffold_574_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5520..5885
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UR15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78204.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
GntR family transcriptional regulator
L1_007_365G1_scaffold_574_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5891..7255
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78205.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_574_12
unknown

Not on your lists

7535..7993
DNA (459bp) protein (153aa)

This feature has no annotations

L1_007_365G1_scaffold_574_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7986..8645)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79675.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_574_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9154..9309)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79502.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_574_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9640..10974
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79500.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Trk-type K+ transport systems, membrane components
L1_007_365G1_scaffold_574_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10993..11640
DNA (648bp) protein (216aa)
K+ transport systems NAD-binding component n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7X1_9FIRM
K+ transport systems NAD-binding component {ECO:0000313|EMBL:CCZ79501.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
K+ transport systems, NAD-binding component
L1_007_365G1_scaffold_574_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11644..12255)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79502.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_574_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12477..14048
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79503.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L1_007_365G1_scaffold_574_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14083..15027)
DNA (945bp) protein (315aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
6-phosphofructokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUZ2_9FIRM
6-phosphofructokinase {ECO:0000313|EMBL:CCZ79504.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_574_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15050..16516)
DNA (1467bp) protein (489aa)
Beta-fructosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN78_9FIRM
Beta-fructosidase {ECO:0000313|EMBL:CCZ79505.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sucrose-6-phosphate hydrolase
L1_007_365G1_scaffold_574_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16531..18210)
DNA (1680bp) protein (560aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7X5_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCZ79506.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_365G1_scaffold_574_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18232..19128)
DNA (897bp) protein (299aa)
ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFN8_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCZ79507.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_365G1_scaffold_574_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19141..20079)
DNA (939bp) protein (313aa)
ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMM7_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCZ79508.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_007_365G1_scaffold_574_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20299..21324
DNA (1026bp) protein (342aa)
Repressor protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUZ6_9FIRM
Repressor protein {ECO:0000313|EMBL:CCZ79509.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_574_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21337..22734)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79510.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_574_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22917..23339)
DNA (423bp) protein (141aa)
Heat shock protein Hsp20 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7X9_9FIRM
Heat shock protein Hsp20 {ECO:0000313|EMBL:CCZ79511.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
heat shock protein Hsp20
L1_007_365G1_scaffold_574_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23803..24195
DNA (393bp) protein (131aa)
Putative sensory box histidine kinase/response regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFP3_9FIRM
Putative sensory box histidine kinase/response regulator {ECO:0000313|EMBL:CCZ79512.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Signal transduction histidine kinase
L1_007_365G1_scaffold_574_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24209..24973
DNA (765bp) protein (255aa)
Putative diguanylate cyclase/response regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMN1_9FIRM
Putative diguanylate cyclase/response regulator {ECO:0000313|EMBL:CCZ79513.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
response regulator domain-containing protein
L1_007_365G1_scaffold_574_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25116..25988)
DNA (873bp) protein (291aa)
EDD domain protein DegV family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UV00_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CCZ79514.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
EDD domain protein, DegV family
L1_007_365G1_scaffold_574_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26043..28007)
DNA (1965bp) protein (655aa)
ATP-dependent DNA helicase, RecQ family (EC:3.6.1.-)
Putative ATP-dependent DNA helicase RecQ n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN91_9FIRM
Putative ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CCZ79515.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Displaying items 1-30 of 57 in total

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