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L1_007_365G1_scaffold_578

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_578_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

111..3080
DNA (2970bp) protein (990aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides RepID=C7XAE0_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEU51217.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L1_007_365G1_scaffold_578_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3101..4648
DNA (1548bp) protein (516aa)
SusD family protein n=4 Tax=Parabacteroides RepID=C7XAD9_9PORP
hypothetical protein
SusD family protein {ECO:0000313|EMBL:EEU51216.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L1_007_365G1_scaffold_578_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4677..5786
DNA (1110bp) protein (370aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LCA1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU51215.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L1_007_365G1_scaffold_578_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6062..6283)
DNA (222bp) protein (74aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LCA2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS68237.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L1_007_365G1_scaffold_578_5
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6491..7348
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC family n=8 Tax=Bacteroidales RepID=C7XAD6_9PORP
transcriptional regulator
Transcription regulator, AraC-type {ECO:0000313|EMBL:EFI07911.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L1_007_365G1_scaffold_578_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7356..8948)
DNA (1593bp) protein (531aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
Alpha-galactosidase n=2 Tax=Parabacteroides RepID=C7XAD5_9PORP
hypothetical protein
L1_007_365G1_scaffold_578_7
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9095..11137)
DNA (2043bp) protein (681aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AIF6_9PORP
Metalloendopeptidase PepO {ECO:0000313|EMBL:CDB48212.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
endopeptidase
L1_007_365G1_scaffold_578_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11320..12855
DNA (1536bp) protein (512aa)
Alpha-L-arabinofuranosidase domain protein n=6 Tax=Bacteroidales RepID=C7XAD3_9PORP
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:EFK61889.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
alpha-L-arabinofuranosidase
L1_007_365G1_scaffold_578_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12938..13840
DNA (903bp) protein (301aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LCA6_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43320.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L1_007_365G1_scaffold_578_10
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14021..15046)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7XAD1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ86080.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L1_007_365G1_scaffold_578_11
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15064..16227)
DNA (1164bp) protein (388aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=C7XAD0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ86079.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
aldo/keto reductase
L1_007_365G1_scaffold_578_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16324..17598)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AIF2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23360.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L1_007_365G1_scaffold_578_13
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17796..18467
DNA (672bp) protein (224aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Peptidyl-prolyl cis-trans isomerase n=6 Tax=Bacteroidales RepID=C7XAC8_9PORP
cyclophilin type peptidyl-prolyl cis-trans isomerase
L1_007_365G1_scaffold_578_14
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18473..19237
DNA (765bp) protein (255aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Parabacteroides RepID=C7XAC7_9PORP
cyclophilin type peptidyl-prolyl cis-trans isomerase
L1_007_365G1_scaffold_578_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19328..20389
DNA (1062bp) protein (354aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
DNA polymerase IV n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AI49_9PORP
DNA damage-inducible protein
L1_007_365G1_scaffold_578_16
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20398..22956)
DNA (2559bp) protein (853aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=C7XAC5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27104.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L1_007_365G1_scaffold_578_17
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23179..26091)
DNA (2913bp) protein (971aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6A5W2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27103.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
fkp; bifunctional fucokinase/L-fucose-1-P-guanylyltransferase
L1_007_365G1_scaffold_578_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26237..26866
DNA (630bp) protein (210aa)
Serine type site-specific recombinase n=7 Tax=Bacteroidales RepID=A6LCB5_PARD8
mpi; multiple promoter invertase
Resolvase, N terminal domain protein {ECO:0000313|EMBL:KDS68275.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L1_007_365G1_scaffold_578_19
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27091..27552
DNA (462bp) protein (154aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Nucleoside diphosphate kinase n=5 Tax=Bacteroidales RepID=C7XAC2_9PORP
ndk; nucleoside diphosphate kinase
L1_007_365G1_scaffold_578_20
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27748..28938)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AI44_9PORP
Glycosyltransferase family 4 {ECO:0000313|EMBL:CDB48225.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
glycosyl transferase family protein
L1_007_365G1_scaffold_578_21
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28935..30083)
DNA (1149bp) protein (383aa)
UDP-N-acetylglucosamine 2-epimerase n=2 Tax=Parabacteroides RepID=K6AIE2_9PORP
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDB48226.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
UDP-GlcNAc 2-epimerase
L1_007_365G1_scaffold_578_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30125..31330)
DNA (1206bp) protein (402aa)
Nucleotide sugar dehydrogenase n=2 Tax=Parabacteroides RepID=K6A5V7_9PORP
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EKN23349.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
UDP-ManNAc dehydrogenase
L1_007_365G1_scaffold_578_23
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31392..33002)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K5ZJM1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27097.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
prenyltransferase and squalene oxidase
L1_007_365G1_scaffold_578_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32960..35077)
DNA (2118bp) protein (706aa)
Oxidoreductase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IUD3_9BACE
Oxidoreductase {ECO:0000313|EMBL:EFI07892.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
zinc-binding dehydrogenase
L1_007_365G1_scaffold_578_25
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35080..36075)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AI42_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48230.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
probable glycosyltransferase
L1_007_365G1_scaffold_578_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36423..37505)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AID7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23345.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
glycosyl transferase family protein
L1_007_365G1_scaffold_578_27
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37502..38683)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7XAB4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51191.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L1_007_365G1_scaffold_578_28
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38730..39668)
DNA (939bp) protein (313aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B5N6_9PORP
Glycosyltransferase family 2 {ECO:0000313|EMBL:CDB48233.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
glycosyl transferase family protein
L1_007_365G1_scaffold_578_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39769..41316)
DNA (1548bp) protein (516aa)
Putative flippase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCC6_PARD8
flippase
Putative flippase {ECO:0000313|EMBL:ABR43340.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L1_007_365G1_scaffold_578_30
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41536..41910)
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LCC7_PARD8
nucleotidyltransferase
Putative toxin-antitoxin system, antitoxin component {ECO:0000313|EMBL:EEU51187.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Displaying items 1-30 of 36 in total

View Taxonomy