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L1_007_365G1_scaffold_579

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_579_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..2155
DNA (2154bp) protein (718aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97703.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_579_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2260..2541
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95222.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_579_3

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comp(2686..4194)
DNA (1509bp) protein (503aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
Glycoside hydrolase family77 n=1 Tax=uncultured bacterium RepID=S6CP53_9BACT
L1_007_365G1_scaffold_579_4

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comp(4207..5025)
DNA (819bp) protein (273aa)
Metaldependent hydrolase n=1 Tax=uncultured bacterium RepID=S6CPR3_9BACT
Metaldependent hydrolase {ECO:0000313|EMBL:CCG34907.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Metal-dependent hydrolase
L1_007_365G1_scaffold_579_5

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comp(5032..6714)
DNA (1683bp) protein (561aa)
Phosphotransferase system EIIC component n=1 Tax=uncultured bacterium RepID=S6CQ55_9BACT
Phosphotransferase system EIIC component {ECO:0000313|EMBL:CCG34908.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PTS system maltose-specific IIA component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIB component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIC component, Glc family (TC 4.A.1.1.11)
L1_007_365G1_scaffold_579_6

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7001..8023
DNA (1023bp) protein (341aa)
Transcriptional regulator LacI family n=1 Tax=uncultured bacterium RepID=S6CPC2_9BACT
Transcriptional regulator LacI family {ECO:0000313|EMBL:CCG34909.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transcriptional regulator, LacI family
L1_007_365G1_scaffold_579_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8083..8940)
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA47_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEU95223.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
AraC-type DNA-binding domain-containing proteins
L1_007_365G1_scaffold_579_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9069..11330
DNA (2262bp) protein (754aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA48_9FIRM
L1_007_365G1_scaffold_579_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11717..13771)
DNA (2055bp) protein (685aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EEU95225.1}; EC=3.6.3.- {ECO:0000313|EMBL:EEU95225.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Heavy metal translocating P-type ATPase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA49_9FIRM
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L1_007_365G1_scaffold_579_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13870..14148)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SHX0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00764.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_365G1_scaffold_579_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14402..15112)
DNA (711bp) protein (237aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA59_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU95235.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_579_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15105..17078)
DNA (1974bp) protein (658aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA60_9FIRM
L1_007_365G1_scaffold_579_13
unknown

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comp(17121..17249)
DNA (129bp) protein (43aa)

This feature has no annotations

L1_007_365G1_scaffold_579_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17268..17915)
DNA (648bp) protein (216aa)
K+ transport systems, NAD-binding component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZB1_9FIRM
K+ transport systems, NAD-binding component
K+ transport systems, NAD-binding component {ECO:0000313|EMBL:CBK99360.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_579_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17927..19264)
DNA (1338bp) protein (446aa)
Potassium uptake protein, TrkH family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJQ1_9FIRM
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EFQ06590.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Trk-type K+ transport systems, membrane components
L1_007_365G1_scaffold_579_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19517..20770)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95241.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_579_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20767..21648)
DNA (882bp) protein (294aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA66_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU95242.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_365G1_scaffold_579_18

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comp(21661..22392)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1UID5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC79784.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_365G1_scaffold_579_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22389..22931)
DNA (543bp) protein (181aa)
Sigma-70 region 2 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA68_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EEU95244.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
sigma factor-like protein
L1_007_365G1_scaffold_579_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23261..24217)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07360.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_365G1_scaffold_579_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24189..24683)
DNA (495bp) protein (165aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCT9_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL02652.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_365G1_scaffold_579_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24814..26541)
DNA (1728bp) protein (576aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA80_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU95256.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_365G1_scaffold_579_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26545..28314)
DNA (1770bp) protein (590aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C727_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI79833.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_365G1_scaffold_579_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28383..29138)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95258.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_579_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29212..30189)
DNA (978bp) protein (326aa)
Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA83_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEU95259.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator
L1_007_365G1_scaffold_579_26
unknown

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comp(30182..30277)
DNA (96bp) protein (32aa)

This feature has no annotations

L1_007_365G1_scaffold_579_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30314..30583)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95260.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted divalent heavy-metal cations transporter
L1_007_365G1_scaffold_579_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30644..31123)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S8S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22408.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_007_365G1_scaffold_579_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31270..31872)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHH7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFQ07367.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L1_007_365G1_scaffold_579_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31879..32511)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C5N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79840.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
Displaying items 1-30 of 50 in total

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