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L1_007_365G1_scaffold_582

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_582_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..300)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22519.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TRSE protein
L1_007_365G1_scaffold_582_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(410..2221)
DNA (1812bp) protein (604aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
Putative group II intron-encoded protein LtrA n=4 Tax=Clostridiales RepID=G9YPL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28154.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_582_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2290..2379)
DNA (90bp) protein (30aa)
Methionine adenosyltransferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D4R9_9CLOT
Methionine adenosyltransferase {ECO:0000313|EMBL:ERI76502.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_007_365G1_scaffold_582_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3100..3978
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68711.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L1_007_365G1_scaffold_582_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3975..4475
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68712.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L1_007_365G1_scaffold_582_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4472..6340
DNA (1869bp) protein (623aa)
TraG/TraD family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5Q5_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EEF68713.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Type IV secretory pathway, VirD4 components
L1_007_365G1_scaffold_582_7
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6344..6559
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9L855_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS54865.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L1_007_365G1_scaffold_582_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6628..7491
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=root RepID=B9Y5S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68668.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L1_007_365G1_scaffold_582_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7506..7910
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68670.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L1_007_365G1_scaffold_582_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7858..9264
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68670.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Type IV secretory pathway, VirB4 component
L1_007_365G1_scaffold_582_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9176..9676)
DNA (501bp) protein (167aa)
Methyltransferase domain protein n=2 Tax=Clostridiales RepID=U2B8J6_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:ERI68133.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_365G1_scaffold_582_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9805..11424)
DNA (1620bp) protein (540aa)
putative alkyl hydroperoxide reductase F subunit (EC:1.8.1.9)
Thioredoxin-disulfide reductase n=3 Tax=Clostridiales RepID=H1CFL1_9FIRM
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EHO32546.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_582_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11428..11991)
DNA (564bp) protein (188aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D8T7_9CLOT
Peroxiredoxin {ECO:0000313|EMBL:ERI75941.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_007_365G1_scaffold_582_14
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12361..13374)
DNA (1014bp) protein (338aa)
ApbE family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWR9_9FIRM
ApbE family protein {ECO:0000313|EMBL:EDM99606.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
apbE; thiamin biosynthesis lipoprotein ApbE
L1_007_365G1_scaffold_582_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13699..18720
DNA (5022bp) protein (1674aa)
Repeat protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWS1_9FIRM
Repeat protein {ECO:0000313|EMBL:EDM99608.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_007_365G1_scaffold_582_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18939..19544)
DNA (606bp) protein (202aa)
Resolvase n=3 Tax=Clostridiales RepID=R0CX64_9CLOT
Site-specific recombinases, DNA invertase Pin homologs
Resolvase protein {ECO:0000313|EMBL:ERK66425.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L1_007_365G1_scaffold_582_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19837..19956)
DNA (120bp) protein (40aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R5X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68485.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L1_007_365G1_scaffold_582_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19913..20452)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R5X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68485.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L1_007_365G1_scaffold_582_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20449..21264)
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QM31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68484.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L1_007_365G1_scaffold_582_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21278..22081)
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R512_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68483.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L1_007_365G1_scaffold_582_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22074..22997)
DNA (924bp) protein (308aa)
Bacitracin ABC transporter, ATP-binding protein BcrA n=2 Tax=Oscillibacter RepID=U2SMX5_9FIRM
Bacitracin ABC transporter, ATP-binding protein BcrA {ECO:0000313|EMBL:ERK68482.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ABC transporter
L1_007_365G1_scaffold_582_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23153..23845
DNA (693bp) protein (231aa)
Putative sensory transduction protein RegX3 n=2 Tax=Oscillibacter RepID=U2RI34_9FIRM
Putative sensory transduction protein RegX3 {ECO:0000313|EMBL:ERK68481.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_582_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23842..25203
DNA (1362bp) protein (454aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Oscillibacter RepID=U2QZW7_9FIRM
Signal transduction histidine kinase
L1_007_365G1_scaffold_582_24
unknown

Not on your lists

25931..26614
DNA (684bp) protein (228aa)

This feature has no annotations

L1_007_365G1_scaffold_582_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27423..27584)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33696.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_582_26
unknown

Not on your lists

28140..28439
DNA (300bp) protein (100aa)

This feature has no annotations

L1_007_365G1_scaffold_582_27
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(28388..29671)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y385_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD28315.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L1_007_365G1_scaffold_582_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29668..33711)
DNA (4044bp) protein (1348aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97833.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
chromosome segregation ATPase-like protein
L1_007_365G1_scaffold_582_29
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(33689..34846)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6XX38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD28318.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L1_007_365G1_scaffold_582_30
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34839..36326)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97835.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
Displaying items 1-30 of 40 in total

View Taxonomy