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L1_007_365G1_scaffold_595

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_595_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..377
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J879_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78531.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_595_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(483..746)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJS2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93869.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_365G1_scaffold_595_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(771..1325)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J881_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78533.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_595_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1329..1907)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J882_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78534.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L1_007_365G1_scaffold_595_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2047..2985)
DNA (939bp) protein (313aa)
Elongation factor Ts n=2 Tax=Ruminococcus RepID=C6J884_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
translation elongation factor Ts (EF-Ts)
L1_007_365G1_scaffold_595_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3086..3829)
DNA (744bp) protein (248aa)
30S ribosomal protein S2 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J885_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
SSU ribosomal protein S2P
L1_007_365G1_scaffold_595_7
unknown

Not on your lists

comp(3826..4071)
DNA (246bp) protein (82aa)

This feature has no annotations

L1_007_365G1_scaffold_595_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4156..4923)
DNA (768bp) protein (256aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J886_9FIRM
L1_007_365G1_scaffold_595_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4920..6977)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J887_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78539.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_595_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6952..7854)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J888_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78540.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type multidrug transport system, ATPase component
L1_007_365G1_scaffold_595_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7851..8225)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J889_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78541.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, GntR family
L1_007_365G1_scaffold_595_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8576..9226)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J890_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78542.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
CAAX amino terminal protease family.
L1_007_365G1_scaffold_595_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9415..10062)
DNA (648bp) protein (216aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
HAD hydrolase, family IA n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J891_9FIRM
HAD hydrolase, family IA {ECO:0000313|EMBL:EES78543.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_595_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10129..11157)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J892_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78544.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
lipoprotein, putative
L1_007_365G1_scaffold_595_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11141..12397)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J893_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78545.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Serine/threonine protein kinase fused to TPR repeats domain
L1_007_365G1_scaffold_595_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12670..14436)
DNA (1767bp) protein (589aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J894_9FIRM
L1_007_365G1_scaffold_595_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14461..15333)
DNA (873bp) protein (291aa)
DegV family EDD domain-containing protein n=2 Tax=Ruminococcus RepID=C6J895_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EES78547.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
EDD domain protein, DegV family
L1_007_365G1_scaffold_595_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15542..17158)
DNA (1617bp) protein (539aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=2 Tax=Ruminococcus RepID=C6J896_9FIRM
L1_007_365G1_scaffold_595_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17213..17470)
DNA (258bp) protein (86aa)
HPr family phosphocarrier n=2 Tax=Ruminococcus RepID=C6J897_9FIRM
PTS system phosphocarrier protein Hpr {ECO:0000313|EMBL:CDD77258.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphotransferase system, phosphocarrier protein HPr
L1_007_365G1_scaffold_595_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17768..19027)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J898_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78550.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type antimicrobial peptide transport system, permease component
L1_007_365G1_scaffold_595_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19047..21068)
DNA (2022bp) protein (674aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J899_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78551.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_595_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21074..21745)
DNA (672bp) protein (224aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78552.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_595_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21742..23220)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80460.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Membrane-fusion protein
L1_007_365G1_scaffold_595_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23504..24715
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78554.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_595_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24883..25641)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78555.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted permeases
L1_007_365G1_scaffold_595_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25644..27440)
DNA (1797bp) protein (599aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR32_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDD80455.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_595_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27494..28720)
DNA (1227bp) protein (409aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80453.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_595_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28683..29345)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78558.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
HD-GYP domain
L1_007_365G1_scaffold_595_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29363..30877)
DNA (1515bp) protein (505aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80450.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_595_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30870..31499)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80449.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Zn-dependent hydrolases, including glyoxylases
Displaying items 1-30 of 41 in total

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