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L1_007_365G1_scaffold_598

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_598_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

521..1579
DNA (1059bp) protein (353aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C8A6_BIFBA
mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:AEF26552.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_365G1_scaffold_598_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1599..2390
DNA (792bp) protein (264aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DYP3_BIFBR
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ERI85016.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Short chain dehydrogenase
L1_007_365G1_scaffold_598_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2534..3427
DNA (894bp) protein (298aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Putative dihydrodipicolinate synthase n=2 Tax=Bifidobacterium breve RepID=F6C8A9_BIFBA
Putative dihydrodipicolinate synthase {ECO:0000313|EMBL:AEF27116.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_365G1_scaffold_598_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3454..5805
DNA (2352bp) protein (784aa)
alpha-galactosidase n=1 Tax=Bifidobacterium breve RepID=UPI0003035ED0
Hypothetical protein (Glycosyl hydrolases family 95)
Uncharacterized protein {ECO:0000313|EMBL:AHJ21459.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_598_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5944..6771)
DNA (828bp) protein (276aa)
glyoxal reductase n=1 Tax=Bifidobacterium breve RepID=UPI0002FE7DBF
Aldo/keto reductase family
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EFE88104.1}; Putative reductase {ECO:0000313|EMBL:BAR00387.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_598_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6886..7209
DNA (324bp) protein (108aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Acylphosphatase n=3 Tax=Bifidobacterium breve RepID=F6C8B2_BIFBA
Acylphosphatase
L1_007_365G1_scaffold_598_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7312..8694
DNA (1383bp) protein (461aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Histidinol dehydrogenase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZZ51_BIFBR
Histidinol dehydrogenase
L1_007_365G1_scaffold_598_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8691..9851
DNA (1161bp) protein (387aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Histidinol-phosphate aminotransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C3G5_BIFBR
Histidinol-phosphate aminotransferase
L1_007_365G1_scaffold_598_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9929..10528
DNA (600bp) protein (200aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Imidazoleglycerol-phosphate dehydratase n=4 Tax=Bifidobacterium breve RepID=F6C8B5_BIFBA
Imidazoleglycerol-phosphate dehydratase
L1_007_365G1_scaffold_598_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10528..11274
DNA (747bp) protein (249aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C8B6_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95958.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_365G1_scaffold_598_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11305..11952
DNA (648bp) protein (216aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Imidazole glycerol phosphate synthase subunit HisH n=5 Tax=Bifidobacterium breve RepID=F6C8B7_BIFBA
Imidazole glycerol phosphate synthase subunit hisH
L1_007_365G1_scaffold_598_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11976..12701
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bifidobacterium breve RepID=F9Y1R8_BIFBU
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
L1_007_365G1_scaffold_598_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12930..14366)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0I4_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75323.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_598_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14468..15805
DNA (1338bp) protein (446aa)
glutamine synthetase n=1 Tax=Bifidobacterium breve RepID=UPI0002E71B8C
Glutamine synthetase
Glutamine synthetase, type I {ECO:0000313|EMBL:EPD75324.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_598_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16016..17221
DNA (1206bp) protein (402aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1R5_BIFBU
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE95953.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_365G1_scaffold_598_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17230..21366)
DNA (4137bp) protein (1379aa)
ATP-dependent helicase n=1 Tax=Bifidobacterium breve RepID=UPI0002EEBFF1
hrpA; ATP-dependent helicase hrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:AEF26691.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_365G1_scaffold_598_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21356..22012)
DNA (657bp) protein (219aa)
Methyltransferase small domain protein n=4 Tax=Bifidobacterium breve RepID=F6C8C2_BIFBA
16S RNA methylase
16S RNA methylase {ECO:0000313|EMBL:AHJ21446.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_598_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22136..23641
DNA (1506bp) protein (502aa)
GTPase HflX n=2 Tax=Bifidobacterium breve RepID=F6C8C3_BIFBA
hflX; GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_598_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23826..24788
DNA (963bp) protein (321aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L-lactate dehydrogenase n=8 Tax=Bifidobacterium RepID=F6C8C4_BIFBA
L-lactate dehydrogenase
L1_007_365G1_scaffold_598_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25042..25986)
DNA (945bp) protein (315aa)
cation transporter n=1 Tax=Bifidobacterium breve RepID=UPI0002FBF689
Cobalt-zinc-cadmium resistance protein czcD
Cobalt-zinc-cadmium resistance protein czcD {ECO:0000313|EMBL:AHJ21443.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_598_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26137..26850)
DNA (714bp) protein (238aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
LexA repressor n=6 Tax=Bifidobacterium breve RepID=F6C8C6_BIFBA
L1_007_365G1_scaffold_598_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27001..27384
DNA (384bp) protein (128aa)
LysM domain protein n=4 Tax=Bifidobacterium breve RepID=F6C8C7_BIFBA
LysM domain protein
LysM domain protein {ECO:0000313|EMBL:AEF26765.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_365G1_scaffold_598_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27437..27877
DNA (441bp) protein (147aa)
Transcriptional repressor NrdR n=3 Tax=Bifidobacterium breve RepID=F9Y1Q7_BIFBU
Hypothetical protein with ATP cone domain
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_598_24
unknown

Not on your lists

27877..28029
DNA (153bp) protein (51aa)

This feature has no annotations

L1_007_365G1_scaffold_598_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27954..29153)
DNA (1200bp) protein (400aa)
D-3-phosphoglycerate dehydrogenase n=5 Tax=Bifidobacterium breve RepID=H3L0J5_BIFBR
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:BAR00368.1}; Putative phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EFE88124.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_598_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29164..31443)
DNA (2280bp) protein (760aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ATP-dependent DNA helicase n=1 Tax=Bifidobacterium breve RepID=UPI0003105770
ATP-dependent DNA helicase
L1_007_365G1_scaffold_598_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31770..32291
DNA (522bp) protein (174aa)
Protein MraZ n=5 Tax=Bifidobacterium breve RepID=F6C8K8_BIFBA
Cell division protein mraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_598_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32291..33343
DNA (1053bp) protein (351aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Ribosomal RNA small subunit methyltransferase H n=2 Tax=Bifidobacterium breve RepID=F6C8K9_BIFBA
S-adenosyl-methyltransferase mraW
L1_007_365G1_scaffold_598_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33346..33798
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=H3L0K0_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95940.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_365G1_scaffold_598_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33795..35585
DNA (1791bp) protein (597aa)
ftsI; Peptidoglycan synthetase FtsI, penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRR7_BIFBR
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EFE88130.1}; Peptidoglycan synthase {ECO:0000313|EMBL:BAR00363.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Displaying items 1-30 of 61 in total

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