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L1_007_365G1_scaffold_625

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_625_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..870)
DNA (870bp) protein (290aa)
Relaxase/Mobilisation nuclease domain n=2 Tax=Clostridiales RepID=D4KA58_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBL01721.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_365G1_scaffold_625_2

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comp(956..1585)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZF11_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61915.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
L1_007_365G1_scaffold_625_3

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comp(1585..2751)
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZF10_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61914.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
L1_007_365G1_scaffold_625_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3383..3775)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGC5_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
rpsI; 30S ribosomal protein S9
L1_007_365G1_scaffold_625_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3795..4223)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNE5_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
rplM; 50S ribosomal protein L13
L1_007_365G1_scaffold_625_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4529..5263)
DNA (735bp) protein (245aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVQ6_9FIRM
L1_007_365G1_scaffold_625_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5338..6153)
DNA (816bp) protein (272aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP01_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
cobalt transport protein
L1_007_365G1_scaffold_625_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6179..7042)
DNA (864bp) protein (288aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type cobalt transport system ATPase component n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8N1_9FIRM
ABC-type cobalt transport system, ATPase component
L1_007_365G1_scaffold_625_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7076..7933)
DNA (858bp) protein (286aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGC9_9FIRM
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_625_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7935..8438)
DNA (504bp) protein (168aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNF0_9FIRM
L1_007_365G1_scaffold_625_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8442..9614)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79814.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Aspartate/tyrosine/aromatic aminotransferase
L1_007_365G1_scaffold_625_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9614..10093)
DNA (480bp) protein (160aa)
Transcriptional regulatory protein AsnC family (AsnC) n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP05_9FIRM
Transcriptional regulatory protein AsnC family (AsnC) {ECO:0000313|EMBL:CCZ79815.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AsnC family transcriptional regulator
L1_007_365G1_scaffold_625_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10108..11085)
DNA (978bp) protein (326aa)
Hydrogenase expression/formation protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8N5_9FIRM
Hydrogenase expression/formation protein {ECO:0000313|EMBL:CCZ79816.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hydrogenase expression/formation protein
L1_007_365G1_scaffold_625_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11097..12773)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79817.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_625_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12843..12956)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79818.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_625_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13023..13610
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79819.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_625_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13591..14409)
DNA (819bp) protein (273aa)
exonuclease, DNA polymerase III, epsilon subunit family (EC:2.7.7.7)
Exonuclease DNA polymerase III epsilon subunit family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP10_9FIRM
Exonuclease DNA polymerase III epsilon subunit family {ECO:0000313|EMBL:CCZ79820.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_625_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14384..14959)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8P0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79821.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_625_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14983..17142)
DNA (2160bp) protein (720aa)
X-X-X-Leu-X-X-Gly heptad repeats n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGE0_9FIRM
X-X-X-Leu-X-X-Gly heptad repeats {ECO:0000313|EMBL:CCZ79822.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transmembrane protein
L1_007_365G1_scaffold_625_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17155..19233)
DNA (2079bp) protein (693aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79823.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_625_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19393..19959)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79824.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_625_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19974..20219)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79825.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_625_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20185..20793)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79826.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_625_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20901..21383
DNA (483bp) protein (161aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGE5_9FIRM
hypothetical protein
L1_007_365G1_scaffold_625_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21428..22393)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79828.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_625_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22498..23115)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79829.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_625_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23230..23739)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79830.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_625_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24818..25732)
DNA (915bp) protein (305aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4S3_9FIRM
Thioredoxin reductase {ECO:0000313|EMBL:CCZ78451.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_625_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26217..27575
DNA (1359bp) protein (453aa)
Putative divalent cation transport protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK96_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative divalent cation transport protein
L1_007_365G1_scaffold_625_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27728..28141)
DNA (414bp) protein (138aa)
Predicted metal-dependent protease of the PAD1/JAB1 superfamily n=1 Tax=Roseburia sp. CAG:18 RepID=R5URT1_9FIRM
Predicted metal-dependent protease of the PAD1/JAB1 superfamily {ECO:0000313|EMBL:CCZ78449.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted metal-dependent protease of the PAD1/JAB1 superfamily
Displaying items 1-30 of 50 in total

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