ggKbase home page

L1_007_365G1_scaffold_645

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_645_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(363..1628)
DNA (1266bp) protein (422aa)
Signal recognition particle receptor FtsY n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6L7_BIFBA
Cell division protein ftsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_645_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1713..2543
DNA (831bp) protein (277aa)
Transcriptional regulator, TetR family n=6 Tax=Bifidobacterium breve RepID=F6C6L6_BIFBA
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AHJ20464.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_645_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2567..3601
DNA (1035bp) protein (345aa)
Glycosyltransferase, group 2 family protein n=5 Tax=Bifidobacterium breve RepID=F6C6L5_BIFBA
Glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EPD76525.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_645_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3666..5186)
DNA (1521bp) protein (507aa)
Dipeptidase A n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYN0_BIFBR
Dipeptidase A {ECO:0000313|EMBL:AHJ18549.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Dipeptidase A
L1_007_365G1_scaffold_645_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5416..7041)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CKJ3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI84588.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L1_007_365G1_scaffold_645_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7577..9115
DNA (1539bp) protein (513aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0N2_BIFBU
Glucose-6-phosphate 1-dehydrogenase
L1_007_365G1_scaffold_645_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9112..10134
DNA (1023bp) protein (341aa)
Glucose-6-phosphate dehydrogenase subunit n=5 Tax=Bifidobacterium breve RepID=F9Y0N1_BIFBU
glucose-6-phosphate dehydrogenase subunit
Putative opcA protein {ECO:0000313|EMBL:AEF26531.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_365G1_scaffold_645_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10257..11099
DNA (843bp) protein (281aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase {ECO:0000313|EMBL:ABE94942.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ABE94942.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
6-phosphogluconolactonase n=2 Tax=Bifidobacterium breve RepID=F9Y0N0_BIFBU
L1_007_365G1_scaffold_645_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11300..12754)
DNA (1455bp) protein (485aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
6-phosphogluconate dehydrogenase, decarboxylating n=5 Tax=Bifidobacterium breve RepID=F6C6K9_BIFBA
6-phosphogluconate dehydrogenase
L1_007_365G1_scaffold_645_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12955..14313)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=D4BM14_BIFBR
Hypothetical membrane spanning protein with DUF1113 domain
Uncharacterized protein {ECO:0000313|EMBL:EFE89833.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_645_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14788..17412
DNA (2625bp) protein (875aa)
YhgE/Pip domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6K7_BIFBA
putative membrane spanning protein with similarity to phage infection protein
YhgE/Pip domain protein {ECO:0000313|EMBL:AEF26878.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_365G1_scaffold_645_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17409..19571
DNA (2163bp) protein (721aa)
YhgE/Pip domain protein n=2 Tax=Bifidobacterium breve RepID=D4BM11_BIFBR
phage infection protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ99220.1}; YhgE/Pip domain protein {ECO:0000313|EMBL:EFE89830.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_645_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19666..20259
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=4 Tax=Bifidobacterium breve RepID=F9Y0M5_BIFBU
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFE89829.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_645_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20355..20483)
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BM09_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89828.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_645_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20518..21069)
DNA (552bp) protein (184aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C6K4_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89827.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_645_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21135..21932)
DNA (798bp) protein (266aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6K3_BIFBA
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ20451.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_645_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21948..23342)
DNA (1395bp) protein (465aa)
Permease domain protein n=3 Tax=Bifidobacterium breve RepID=H3KYL6_BIFBR
Permease protein of ABC transporter system
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERI84602.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_365G1_scaffold_645_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23375..24679)
DNA (1305bp) protein (435aa)
Permease protein of ABC transporter system n=3 Tax=Bifidobacterium breve RepID=F9Y0M1_BIFBU
Permease protein of ABC transporter system
Permease protein of ABC transporter system {ECO:0000313|EMBL:ABE94933.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_365G1_scaffold_645_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24702..25970)
DNA (1269bp) protein (423aa)
Conserved hypothetical membrane spanning protein n=2 Tax=Bifidobacterium breve RepID=F9Y0M0_BIFBU
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE94932.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_365G1_scaffold_645_20
unknown

Not on your lists

comp(25946..26119)
DNA (174bp) protein (58aa)

This feature has no annotations

L1_007_365G1_scaffold_645_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26237..26932)
DNA (696bp) protein (232aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C6J9_BIFBA
putative secreted protein, probably involved in iron uptake
Uncharacterized protein {ECO:0000313|EMBL:AEF28124.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_365G1_scaffold_645_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27050..28966)
DNA (1917bp) protein (639aa)
Iron permease FTR1 family n=2 Tax=Bifidobacterium breve RepID=D4BM02_BIFBR
putative membrane spanning protein with iron permease FTR1 family domain
Putative membrane spanning protein with iron permease FTR1 family domain {ECO:0000313|EMBL:AHJ20446.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_645_23
unknown

Not on your lists

29465..29980
DNA (516bp) protein (172aa)

This feature has no annotations

L1_007_365G1_scaffold_645_24
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30009..30710
DNA (702bp) protein (234aa)
Phage integrase family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXN5_BIFLJ
DNA integration/recombination/inversion protein
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:KFI96888.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
L1_007_365G1_scaffold_645_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31453..32973)
DNA (1521bp) protein (507aa)
gltX; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Glutamate--tRNA ligase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6H6_BIFBA
L1_007_365G1_scaffold_645_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33018..33122)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AJH8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76504.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_645_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33394..34743
DNA (1350bp) protein (450aa)
Conserved hypothetical membrane spanning protein with DUF805 domain n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0J2_BIFBU
Hypothetical membrane spanning protein with DUF805 domain
Hypothetical membrane spanning protein with DUF805 domain {ECO:0000313|EMBL:AHJ18521.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_365G1_scaffold_645_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34864..36048)
DNA (1185bp) protein (395aa)
carboxy-cis,cis-muconate cyclase n=1 Tax=Bifidobacterium breve RepID=UPI0002EC7AA6
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76502.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_645_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36245..37213)
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C6H3_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27027.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_365G1_scaffold_645_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37478..38137)
DNA (660bp) protein (220aa)
Phosphoglycerate mutase family protein n=2 Tax=Bifidobacterium breve RepID=F6C6H2_BIFBA
phosphoglycerate mutase family protein
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:AEF27956.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Displaying items 1-30 of 47 in total

View Taxonomy