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L1_007_365G1_scaffold_656

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_656_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(147..611)
DNA (465bp) protein (155aa)
Transposase IS200-family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4I2_CLOSW
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:ADL05052.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_007_365G1_scaffold_656_2
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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834..1838
DNA (1005bp) protein (335aa)
Cobalamin biosynthesis protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYI9_9FIRM
Cobalamin biosynthesis protein {ECO:0000313|EMBL:CDF06219.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
cobalamin biosynthesis protein
L1_007_365G1_scaffold_656_3
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1851..2660
DNA (810bp) protein (270aa)
Cobalt transport protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQB6_MEGEL
cobalt transport protein
Cobalt transport protein {ECO:0000313|EMBL:CCC73644.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_365G1_scaffold_656_4
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2657..3298
DNA (642bp) protein (214aa)
Cobalt import ATP-binding protein CbiO 2 n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQB5_MEGEL
cobalt import ATP-binding protein CbiO 2
Cobalt import ATP-binding protein CbiO 2 {ECO:0000313|EMBL:CCC73643.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_365G1_scaffold_656_5
Selenomonas noxia, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3607..5010)
DNA (1404bp) protein (468aa)
Putative uncharacterized protein n=1 Tax=Selenomonas noxia F0398 RepID=G5H3A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHG24552.1}; TaxID=702437 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas noxia F0398.;"
sodium-alanine symporter
L1_007_365G1_scaffold_656_6
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5228..6430)
DNA (1203bp) protein (401aa)
diaminopropionate ammonia-lyase (EC:4.3.1.15)
Diaminopropionate ammonia-lyase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGF9_9FIRM
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:ETP71903.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
L1_007_365G1_scaffold_656_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6442..7602)
DNA (1161bp) protein (387aa)
hipO; amidohydrolase (EC:3.5.1.32)
Amidohydrolase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGG0_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EEQ57295.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_007_365G1_scaffold_656_8
Acidaminococcus sp. CAG:542, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7711..8607)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Acidaminococcus sp. CAG:542 RepID=R7M0M8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE94225.1}; TaxID=1262687 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:542.;"
araC; transcriptional regulator AraC
L1_007_365G1_scaffold_656_9
Acidaminococcus sp. CAG:542, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8799..10022
DNA (1224bp) protein (408aa)
amidase (EC:3.5.1.6)
Amidase n=1 Tax=Acidaminococcus sp. CAG:542 RepID=R7LZG1_9FIRM
Amidase {ECO:0000313|EMBL:CDE94224.1}; TaxID=1262687 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:542.;"
L1_007_365G1_scaffold_656_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10230..11438)
DNA (1209bp) protein (403aa)
Lipoprotein n=2 Tax=Megasphaera RepID=S7HGJ2_9FIRM
Lipoprotein {ECO:0000313|EMBL:EPP14669.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
lipoprotein
L1_007_365G1_scaffold_656_11
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11428..11829)
DNA (402bp) protein (134aa)
CGGC domain protein n=2 Tax=Megasphaera RepID=S7HIV8_9FIRM
CGGC domain protein {ECO:0000313|EMBL:EPP14670.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
CGGC domain protein
L1_007_365G1_scaffold_656_12
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11844..12518)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MY43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF05236.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
hypothetical protein
L1_007_365G1_scaffold_656_13
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12621..12941)
DNA (321bp) protein (107aa)
Membrane transporter of cations and cationic drugs n=2 Tax=Megasphaera RepID=S7HER9_9FIRM
Membrane transporter of cations and cationic drugs {ECO:0000313|EMBL:EPP14203.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
multidrug transporter
L1_007_365G1_scaffold_656_14
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13232..14110
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQB0_MEGEL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPP14278.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_365G1_scaffold_656_15
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14072..14923)
DNA (852bp) protein (284aa)
Transcriptional regulator n=2 Tax=Megasphaera RepID=S7HHI9_9FIRM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCC73637.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_365G1_scaffold_656_16
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15035..15970
DNA (936bp) protein (312aa)
Putative permease n=2 Tax=Megasphaera RepID=S7IS70_9FIRM
Putative permease {ECO:0000313|EMBL:EPP14281.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
predicted permeases
L1_007_365G1_scaffold_656_17
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16139..17512)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MME6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EOS71811.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
MATE efflux family protein
L1_007_365G1_scaffold_656_18
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17592..18020)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MVK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71812.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Transcriptional regulators
L1_007_365G1_scaffold_656_19
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18205..19146)
DNA (942bp) protein (314aa)
Ornithine carbamoyltransferase {ECO:0000256|SAAS:SAAS00106174}; EC=2.1.3.3 {ECO:0000256|SAAS:SAAS00106174};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Ornithine carbamoyltransferase n=2 Tax=Megasphaera RepID=G0VQA7_MEGEL
Ornithine carbamoyltransferase
L1_007_365G1_scaffold_656_20
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19356..19553)
DNA (198bp) protein (66aa)
Major cold shock protein CspA n=2 Tax=Megasphaera RepID=G0VQA6_MEGEL
major cold shock protein CspA
Major cold shock protein CspA {ECO:0000313|EMBL:CDF05231.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L1_007_365G1_scaffold_656_21
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19687..20178)
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Dihydrofolate reductase n=2 Tax=Megasphaera RepID=S7HFK5_9FIRM
dihydrofolate reductase
L1_007_365G1_scaffold_656_22
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20178..20969)
DNA (792bp) protein (264aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Thymidylate synthase n=1 Tax=Megasphaera sp. BL7 RepID=S7HHJ4_9FIRM
thymidylate synthase
L1_007_365G1_scaffold_656_23
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20987..22810)
DNA (1824bp) protein (608aa)
ATP-dependent DNA helicase RecQ n=2 Tax=Megasphaera RepID=S7IWH5_9FIRM
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EPP14285.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
ATP-dependent DNA helicase RecQ
L1_007_365G1_scaffold_656_24
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22881..24068)
DNA (1188bp) protein (396aa)
Aminotransferase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQA2_MEGEL
aminotransferase
Aminotransferase {ECO:0000313|EMBL:CCC73630.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_365G1_scaffold_656_25
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24337..25527)
DNA (1191bp) protein (397aa)
Aminotransferase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYL7_9FIRM
Aminotransferase {ECO:0000313|EMBL:CDF04962.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
aminotransferase
L1_007_365G1_scaffold_656_26
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25701..26639)
DNA (939bp) protein (313aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQA0_MEGEL
riboflavin biosynthesis protein RibF
L1_007_365G1_scaffold_656_27
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26651..27532)
DNA (882bp) protein (294aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
tRNA pseudouridine synthase B n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ99_MEGEL
tRNA pseudouridine synthase B
L1_007_365G1_scaffold_656_28
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27529..28473)
DNA (945bp) protein (315aa)
DHHA1 domain protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ98_MEGEL
DHHA1 domain protein
DHHA1 domain protein {ECO:0000313|EMBL:CCC73626.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_365G1_scaffold_656_29
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28478..28825)
DNA (348bp) protein (116aa)
Ribosome-binding factor A n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ97_MEGEL
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_365G1_scaffold_656_30
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28841..31333)
DNA (2493bp) protein (831aa)
Translation initiation factor IF-2 n=1 Tax=Megasphaera sp. BL7 RepID=S7HJX8_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
translation initiation factor IF-2
Displaying items 1-30 of 45 in total

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