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L1_007_365G1_scaffold_664

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_664_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..742
DNA (741bp) protein (247aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Bifidobacterium breve RepID=UPI0002F3C8AD
DNA-directed RNA polymerase beta chain
L1_007_365G1_scaffold_664_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

833..4870
DNA (4038bp) protein (1346aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
DNA-directed RNA polymerase subunit beta' n=8 Tax=Bifidobacterium RepID=F6C5Y1_BIFBA
DNA-directed RNA polymerase beta' chain
L1_007_365G1_scaffold_664_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5009..7399)
DNA (2391bp) protein (797aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZK99_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76816.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
putative membrane spanning protein
L1_007_365G1_scaffold_664_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7396..8685)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C5X9_BIFBA
Hypothetical protein with DUF58 domain
Uncharacterized protein {ECO:0000313|EMBL:AEF26356.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_365G1_scaffold_664_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8699..15223)
DNA (6525bp) protein (2175aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2A0_BIFBU
Uncharacterized protein {ECO:0000313|EMBL:ABE95199.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Fused conserved hypothetical protein with a fibronectin type III domain and MoxR protein
L1_007_365G1_scaffold_664_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15195..16355)
DNA (1161bp) protein (387aa)
Kinase domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E0L0_BIFBR
Kinase domain protein {ECO:0000313|EMBL:ERI87582.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Serine/threonine protein kinase
L1_007_365G1_scaffold_664_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16478..20575
DNA (4098bp) protein (1366aa)
ATP-dependent DNA helicase, UvrD/REP family {ECO:0000313|EMBL:ABE95202.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABE95202.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L1M9_BIFBR
ATP-dependent DNA helicase, UvrD/REP family
L1_007_365G1_scaffold_664_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20572..24507
DNA (3936bp) protein (1312aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
UvrD/REP helicase n=2 Tax=Bifidobacterium breve RepID=F6C5X5_BIFBA
ATP-dependent DNA helicase, UvrD/REP family
L1_007_365G1_scaffold_664_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24679..25998
DNA (1320bp) protein (440aa)
Transporter, major facilitator family protein n=5 Tax=Bifidobacterium breve RepID=F6C5X4_BIFBA
transporter, major facilitator family protein
Putative transport protein {ECO:0000313|EMBL:BAQ99468.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_664_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26086..26841
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU27_BIFBR
Dihydrodipicolinate reductase
L1_007_365G1_scaffold_664_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26962..27852
DNA (891bp) protein (297aa)
dapA2; Dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
4-hydroxy-tetrahydrodipicolinate synthase n=3 Tax=Bifidobacterium breve RepID=F9Y2A6_BIFBU
L1_007_365G1_scaffold_664_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27932..29788
DNA (1857bp) protein (619aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZR68_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87576.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Metal-dependent hydrolase
L1_007_365G1_scaffold_664_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29830..32439
DNA (2610bp) protein (870aa)
Aminopeptidase N n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZKB0_BIFBR
pepN; Alanine aminopeptidase
Aminopeptidase N {ECO:0000313|EMBL:EPD76826.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_664_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32648..32989
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E838_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54236.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
transport protein
L1_007_365G1_scaffold_664_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32821..33195)
DNA (375bp) protein (125aa)
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ18774.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_365G1_scaffold_664_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33820..35196
DNA (1377bp) protein (459aa)
ABC transporter substrate binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNA6_BIFLS
sugar-binding protein ABC transporter
Sugar-binding protein ABC transporter {ECO:0000313|EMBL:AHJ18775.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_365G1_scaffold_664_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35291..36169
DNA (879bp) protein (293aa)
Permease of ABC transporter for sugars n=4 Tax=Bifidobacterium breve RepID=F9Y1F2_BIFBU
Permease of ABC transporter for sugars
Permease of ABC transporter for sugars {ECO:0000313|EMBL:AHJ18776.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_365G1_scaffold_664_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36172..37137
DNA (966bp) protein (322aa)
ABC transporter, permease protein, probably Lactose porter n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4IS65_BIFAP
Permease of ABC transporter for sugars
Permease of ABC transporter for sugars {ECO:0000313|EMBL:AHJ18777.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_365G1_scaffold_664_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37168..38334
DNA (1167bp) protein (389aa)
Glycosyl hydrolase, family 1 n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1R6H7_9BIFI
Beta-glucosidase
Beta-glucosidase {ECO:0000313|EMBL:AHJ18778.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_365G1_scaffold_664_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38380..39258
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AQL0_9CLOT
Transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AHJ18779.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_365G1_scaffold_664_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39572..39937
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=D6ZSW4_BIFLJ
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ18780.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_365G1_scaffold_664_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40386..40835
DNA (450bp) protein (150aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Phosphoglucosamine mutase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMW7_BIFBR
mrsA; Phosphoglucosamine mutase
Displaying 22 items

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