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L1_007_365G1_scaffold_665

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_665_1
Acinetobacter calcoaceticus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(216..1121)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S2F8_ACICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEY77625.1}; TaxID=575585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter calcoaceticus RUH2202.;"
L1_007_365G1_scaffold_665_2
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1196..1321)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6QK58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC36155.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_007_365G1_scaffold_665_3
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1490..2083)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000371E524
Uncharacterized protein {ECO:0000313|EMBL:EET60129.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L1_007_365G1_scaffold_665_4
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2076..3398)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000371183E
Uncharacterized protein {ECO:0000313|EMBL:EHL10866.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
SMC domain-containing protein
L1_007_365G1_scaffold_665_5
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3791..4402)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4JBF9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK81680.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_365G1_scaffold_665_6
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4415..5215)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B651FF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK81679.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_365G1_scaffold_665_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5242..6729)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=A8RUN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15897.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
N-6 DNA methylase
L1_007_365G1_scaffold_665_8
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6726..7838)
DNA (1113bp) protein (371aa)
Restriction modification system DNA specificity domain id=4397276 bin=GWF2_Bacteroidetes_40_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
type I restriction-modification system specificity subunit
Tax=BJP_IG2157_Clostridiales_52_13
L1_007_365G1_scaffold_665_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7839..10577)
DNA (2739bp) protein (913aa)
Type I restriction enzyme R subunit n=10 Tax=Clostridium RepID=N9YI40_9CLOT
Type I restriction enzyme R subunit {ECO:0000313|EMBL:ENZ10532.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
type III restriction protein res subunit
L1_007_365G1_scaffold_665_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11086..11709)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76656.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cytidylate kinase
L1_007_365G1_scaffold_665_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11724..12434)
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CNU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98768.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
L1_007_365G1_scaffold_665_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12447..13205)
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPP2_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD79920.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-)
L1_007_365G1_scaffold_665_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13209..14264)
DNA (1056bp) protein (352aa)
Inner-membrane translocator ABC transporter n=2 Tax=Ruminococcus RepID=R7CPQ2_9FIRM
Inner-membrane translocator ABC transporter {ECO:0000313|EMBL:CDD79921.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
inner-membrane translocator
L1_007_365G1_scaffold_665_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14275..15162)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76654.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-)
L1_007_365G1_scaffold_665_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15411..16565)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79923.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L1_007_365G1_scaffold_665_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16995..17351)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNV2_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LSU ribosomal protein L20P
L1_007_365G1_scaffold_665_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17399..17596)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN0_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L35P
L1_007_365G1_scaffold_665_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17632..18126)
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=2 Tax=Ruminococcus RepID=C6JEM9_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
bacterial translation initiation factor 3 (bIF-3)
L1_007_365G1_scaffold_665_19
unknown

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comp(18430..18561)
DNA (132bp) protein (44aa)

This feature has no annotations

L1_007_365G1_scaffold_665_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18657..18986
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75987.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Domain of Unknown Function (DUF1540).
L1_007_365G1_scaffold_665_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19133..20323)
DNA (1191bp) protein (397aa)
Cell division protein FtsZ n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEM7_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cell division protein FtsZ
L1_007_365G1_scaffold_665_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20529..21647)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76647.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cell division septal protein
L1_007_365G1_scaffold_665_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21688..22971)
DNA (1284bp) protein (428aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Ruminococcus RepID=C6JEM5_9FIRM
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L1_007_365G1_scaffold_665_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23052..24149)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75991.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Bacterial cell division membrane protein
L1_007_365G1_scaffold_665_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24236..25591)
DNA (1356bp) protein (452aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CF87_9FIRM
L1_007_365G1_scaffold_665_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25646..26602)
DNA (957bp) protein (319aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=2 Tax=Ruminococcus RepID=C6JEM2_9FIRM
L1_007_365G1_scaffold_665_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26711..28546)
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76642.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
peptidoglycan glycosyltransferase
L1_007_365G1_scaffold_665_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28616..30856)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76641.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cell division protein FtsI/penicillin-binding protein 2
L1_007_365G1_scaffold_665_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30865..31443)
DNA (579bp) protein (193aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76000.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_365G1_scaffold_665_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31459..32394)
DNA (936bp) protein (312aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEL8_9FIRM
Displaying items 1-30 of 37 in total

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