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L1_007_365G1_scaffold_671

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_671_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(185..994)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44170.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_671_2
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1212..2042)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96434.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_365G1_scaffold_671_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2241..3296)
DNA (1056bp) protein (352aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RYR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14662.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L1_007_365G1_scaffold_671_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3293..4369)
DNA (1077bp) protein (359aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5I7_9CLOT
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
L1_007_365G1_scaffold_671_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4366..4803)
DNA (438bp) protein (146aa)
FeS cluster assembly scaffold protein NifU n=10 Tax=Clostridium RepID=G5I6V3_9CLOT
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:ENZ17863.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L1_007_365G1_scaffold_671_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4844..6028)
DNA (1185bp) protein (395aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Cysteine desulfurase NifS n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ19_9CLOT
cysteine desulfurase NifS
L1_007_365G1_scaffold_671_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6320..7936
DNA (1617bp) protein (539aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ23_9CLOT
Stage V sporulation protein B {ECO:0000313|EMBL:KJJ69677.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
polysaccharide biosynthesis protein
L1_007_365G1_scaffold_671_8
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8191..9513
DNA (1323bp) protein (441aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MZB6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EOS76394.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_671_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9643..10494)
DNA (852bp) protein (284aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WJ56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17848.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sugar phosphate isomerase
L1_007_365G1_scaffold_671_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10529..11098)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44163.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_671_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11484..11738)
DNA (255bp) protein (85aa)
Uncharacterized protein n=17 Tax=Clostridium RepID=A8RTG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12954.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
phosphotransferase system, phosphocarrier protein HPr
L1_007_365G1_scaffold_671_12
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12050..12970
DNA (921bp) protein (307aa)
Putative permease n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K822_CLOPA
putative permease
Putative permease {ECO:0000313|EMBL:AGK96664.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L1_007_365G1_scaffold_671_13
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12989..14536
DNA (1548bp) protein (516aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96461.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_365G1_scaffold_671_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14536..16383
DNA (1848bp) protein (616aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5B4_9CLOT
Predicted signal transduction protein with a C-terminal ATPase domain
L1_007_365G1_scaffold_671_15
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16467..17342)
DNA (876bp) protein (292aa)
Transcriptional regulator MerR family n=1 Tax=Clostridium sp. CAG:149 RepID=R5LSD6_9CLOT
Transcriptional regulator MerR family {ECO:0000313|EMBL:CCY82150.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Predicted transcriptional regulators
L1_007_365G1_scaffold_671_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17770..18876)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA PF1_9FIRM">RepID=C5EPF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60031.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_007_365G1_scaffold_671_17
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18873..20060)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ77_9CLOT
ABC-2 family transporter protein {ECO:0000313|EMBL:KJJ69736.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_365G1_scaffold_671_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20072..21718)
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B2A6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ38397.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L1_007_365G1_scaffold_671_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21795..22487)
DNA (693bp) protein (231aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RZJ3_9CLOT
Nodulation ATP-binding protein I {ECO:0000313|EMBL:EEG54401.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC-type multidrug transport system, ATPase component
L1_007_365G1_scaffold_671_20
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22620..23435)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JIW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61255.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_365G1_scaffold_671_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23619..25061)
DNA (1443bp) protein (481aa)
Phosphotransferase system, EIIC n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTC5_9FIRM
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EDN00688.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
L1_007_365G1_scaffold_671_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25076..25975)
DNA (900bp) protein (300aa)
N-acetylmuramic acid 6-phosphate etherase (EC:4.2.-.-)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAX8_9FIRM
L1_007_365G1_scaffold_671_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26126..26977
DNA (852bp) protein (284aa)
Transcriptional regulator, RpiR family n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAX7_9FIRM
transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CBL01990.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_365G1_scaffold_671_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27104..28858)
DNA (1755bp) protein (585aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:306 RepID=R6P3C1_9CLOT
L1_007_365G1_scaffold_671_25
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28978..29415
DNA (438bp) protein (146aa)
Putative transcriptional regulator n=1 Tax=Dialister sp. CAG:357 RepID=R7CS27_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CDD80770.1}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
merR regulatory family protein
L1_007_365G1_scaffold_671_26
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29615..31432)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9Y3D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62561.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Glycoside Hydrolase Family 2 candidate b-glucuronidase
L1_007_365G1_scaffold_671_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31437..32825)
DNA (1389bp) protein (463aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=2 Tax=Clostridium RepID=N9Y0G2_9CLOT
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:ENZ05438.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
glycoside/pentoside/hexuronide:cation symporter, GPH family
L1_007_365G1_scaffold_671_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33053..34276
DNA (1224bp) protein (408aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9Y7C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58522.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
two-component system, response regulator YesN
L1_007_365G1_scaffold_671_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34398..34913
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZPX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ41935.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
sulfonate/nitrate/taurine transport system substrate-binding protein
L1_007_365G1_scaffold_671_30
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34948..35724)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01226.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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