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L1_007_365G1_scaffold_688

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_688_1
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

123..416
DNA (294bp) protein (98aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Acylphosphatase n=4 Tax=Bifidobacterium RepID=E4R1U1_BIFLM
acyP; acyp
L1_007_365G1_scaffold_688_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

533..1915
DNA (1383bp) protein (461aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Histidinol dehydrogenase n=12 Tax=Bifidobacterium RepID=HISX_BIFLO
histidinol dehydrogenase
L1_007_365G1_scaffold_688_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1912..3072
DNA (1161bp) protein (387aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Histidinol-phosphate aminotransferase n=12 Tax=Bifidobacterium RepID=E4R1U3_BIFLM
hisC; hisc
L1_007_365G1_scaffold_688_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3158..3757
DNA (600bp) protein (200aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Imidazoleglycerol-phosphate dehydratase n=13 Tax=Bifidobacterium RepID=HIS7_BIFLO
imidazoleglycerol-phosphate dehydratase
L1_007_365G1_scaffold_688_5
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3757..4551
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MXL4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY96193.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_007_365G1_scaffold_688_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4586..5233
DNA (648bp) protein (216aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GY57_BIFLN
hisH; hish
L1_007_365G1_scaffold_688_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5303..6028
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Bifidobacterium longum RepID=HIS4_BIFLO
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase
L1_007_365G1_scaffold_688_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6132..7577)
DNA (1446bp) protein (482aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV67_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:CCY96190.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_007_365G1_scaffold_688_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7714..9051
DNA (1338bp) protein (446aa)
Glutamine synthetase n=17 Tax=Bifidobacterium RepID=B3DQA6_BIFLD
glutamine synthase
Glutamine synthetase {ECO:0000313|EMBL:ACD97605.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_688_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9287..9838
DNA (552bp) protein (184aa)
Transport protein n=2 Tax=Bifidobacterium longum RepID=F8AP62_BIFLN
transporter
Transporter {ECO:0000313|EMBL:BAP83881.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_365G1_scaffold_688_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9805..10776)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4S1_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25104.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_688_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10773..14909)
DNA (4137bp) protein (1379aa)
ATP-dependent helicase HrpA {ECO:0000313|EMBL:CBK70269.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK70269.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
ATP-dependent helicase HrpA n=6 Tax=Bifidobacterium RepID=D6DCP8_BIFLN
ATP-dependent helicase
L1_007_365G1_scaffold_688_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14899..15555)
DNA (657bp) protein (219aa)
16S rRNA m(2)G 1207 methyltransferase (EC:2.1.1.171)
16S RNA G1207 methylase n=3 Tax=Bifidobacterium longum RepID=B3DQB0_BIFLD
16S RNA G1207 methylase {ECO:0000313|EMBL:ACD97609.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_688_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15714..17219
DNA (1506bp) protein (502aa)
GTPase HflX n=2 Tax=Bifidobacterium longum RepID=B3DQB1_BIFLD
hflX; hflx
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_688_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17400..18362
DNA (963bp) protein (321aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L-lactate dehydrogenase 2 n=19 Tax=Bifidobacterium RepID=LDH2_BIFL2
L-lactate dehydrogenase
L1_007_365G1_scaffold_688_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18504..19442)
DNA (939bp) protein (313aa)
Cation efflux protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AP69_BIFLN
cation efflux protein
Cation efflux protein {ECO:0000313|EMBL:AEI97222.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_007_365G1_scaffold_688_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19608..20333)
DNA (726bp) protein (242aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
LexA repressor n=13 Tax=Bifidobacterium longum RepID=LEXA_BIFLD
lexA1; lexa1
L1_007_365G1_scaffold_688_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20484..20834
DNA (351bp) protein (117aa)
LysM-like protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQB5_BIFLD
peptidoglycan-binding protein LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:BAP83873.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_365G1_scaffold_688_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20851..21327
DNA (477bp) protein (159aa)
Transcriptional repressor NrdR n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ66_BIFLS
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
nrdR; transcriptional regulator NrdR
L1_007_365G1_scaffold_688_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21462..22661)
DNA (1200bp) protein (400aa)
D-3-phosphoglycerate dehydrogenase n=11 Tax=Bifidobacterium RepID=E8ME23_BIFL2
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AAN25113.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_688_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22672..24951)
DNA (2280bp) protein (760aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Superfamily I DNA and RNA helicase n=11 Tax=Bifidobacterium longum RepID=B3DQB8_BIFLD
Superfamily I DNA and RNA helicases
L1_007_365G1_scaffold_688_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25284..25805
DNA (522bp) protein (174aa)
MraZ n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R1W2_BIFLM
hypothetical protein
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_365G1_scaffold_688_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25805..26884
DNA (1080bp) protein (360aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Ribosomal RNA small subunit methyltransferase H n=13 Tax=Bifidobacterium longum RepID=RSMH_BIFLD
S-adenosyl-methyltransferase
L1_007_365G1_scaffold_688_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26891..27340
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=V6XXB9_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY31509.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L1_007_365G1_scaffold_688_25
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27337..29139
DNA (1803bp) protein (601aa)
FtsI1 n=5 Tax=Bifidobacterium RepID=E4R1W5_BIFLM
Penicillin binding transpeptidase domain-containing protein {ECO:0000313|EMBL:EFV36892.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
peptidoglycan synthase
L1_007_365G1_scaffold_688_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29166..30038
DNA (873bp) protein (291aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=V6XZA7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ27782.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_365G1_scaffold_688_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30087..31538
DNA (1452bp) protein (484aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=15 Tax=Bifidobacterium RepID=B3DQM7_BIFLD
murF; murf
L1_007_365G1_scaffold_688_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31583..32689
DNA (1107bp) protein (369aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=9 Tax=Bifidobacterium longum RepID=MRAY_BIFLD
phospho-N-acetylmuramoyl-pentapeptide-transferase
L1_007_365G1_scaffold_688_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32744..34189
DNA (1446bp) protein (482aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=5 Tax=Bifidobacterium longum RepID=MURD_BIFLD
UDP-N-acetylmuramoylalanine--D-glutamate ligase
L1_007_365G1_scaffold_688_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34176..35393
DNA (1218bp) protein (406aa)
Cell division protein FtsW n=5 Tax=Bifidobacterium longum RepID=C5EBR7_BIFLI
cell division protein FtsW
Cell division protein FtsW {ECO:0000313|EMBL:AIW43953.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying items 1-30 of 53 in total

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