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L1_007_365G1_scaffold_708

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_708_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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410..1045
DNA (636bp) protein (212aa)
methionine synthase (EC:2.1.1.13)
Methylmalonyl-CoA mutase domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK1_9FIRM
Methylmalonyl-CoA mutase domain-containing protein {ECO:0000313|EMBL:EES77495.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_708_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1153..2703
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80162.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
PucR family transcriptional regulator
L1_007_365G1_scaffold_708_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2824..3420)
DNA (597bp) protein (199aa)
50S ribosomal protein L25 n=2 Tax=Ruminococcus RepID=C6JCJ9_9FIRM
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LSU ribosomal protein L25P
L1_007_365G1_scaffold_708_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3686..4801)
DNA (1116bp) protein (372aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80160.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_708_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4803..5942)
DNA (1140bp) protein (380aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPI7_9FIRM
L1_007_365G1_scaffold_708_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6385..7785
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80524.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L1_007_365G1_scaffold_708_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7788..8552
DNA (765bp) protein (255aa)
Glycosyl transferase family 2 protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR95_9FIRM
Glycosyl transferase family 2 protein {ECO:0000313|EMBL:CDD80525.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Glycosyltransferases involved in cell wall biogenesis
L1_007_365G1_scaffold_708_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8825..10183
DNA (1359bp) protein (453aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JHS8_9FIRM
Acyltransferase {ECO:0000313|EMBL:CDD80158.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Fucose 4-O-acetylase and related acetyltransferases
L1_007_365G1_scaffold_708_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10490..11797
DNA (1308bp) protein (436aa)
Glycerol-3-phosphate cytidylyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCJ4_9FIRM
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:EES77488.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cytidyltransferase-related domain
L1_007_365G1_scaffold_708_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11794..14220
DNA (2427bp) protein (809aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77487.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LPS biosynthesis protein
L1_007_365G1_scaffold_708_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14245..15405
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80066.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_708_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15417..17159
DNA (1743bp) protein (581aa)
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] (EC:2.2.1.6)
Thiamine pyrophosphate protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP74_9FIRM
Thiamine pyrophosphate protein {ECO:0000313|EMBL:CDD80064.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_708_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17320..18057
DNA (738bp) protein (246aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77484.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_708_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18363..20243
DNA (1881bp) protein (627aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000302040E
Uncharacterized protein {ECO:0000313|EMBL:CDD44257.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L1_007_365G1_scaffold_708_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20363..20590
DNA (228bp) protein (76aa)
50S ribosomal protein L33 n=3 Tax=Ruminococcus RepID=C6JCI9_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L33P
L1_007_365G1_scaffold_708_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20643..20852
DNA (210bp) protein (70aa)
Preprotein translocase, SecE subunit n=2 Tax=Ruminococcus RepID=C6JCI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80058.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
protein translocase subunit secE/sec61 gamma
L1_007_365G1_scaffold_708_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20868..21383
DNA (516bp) protein (172aa)
Transcription termination/antitermination protein NusG n=2 Tax=Ruminococcus RepID=C6JCI7_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcription antitermination protein nusG
L1_007_365G1_scaffold_708_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21454..21879
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=2 Tax=Ruminococcus RepID=C6JCI6_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L11P
L1_007_365G1_scaffold_708_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21941..22633
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=2 Tax=Ruminococcus RepID=C6JCI5_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ribosomal protein L1, bacterial/chloroplast
L1_007_365G1_scaffold_708_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23112..24107
DNA (996bp) protein (332aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77478.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_708_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24408..24755
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77477.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_708_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24848..25393)
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77926.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Rubrerythrin
L1_007_365G1_scaffold_708_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25654..26067)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77475.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Fe2+/Zn2+ uptake regulation proteins
L1_007_365G1_scaffold_708_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27194..29152
DNA (1959bp) protein (653aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCH9_9FIRM
L1_007_365G1_scaffold_708_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29415..29891
DNA (477bp) protein (159aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCH8_9FIRM
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
GTP cyclohydrolase subunit MoaC
L1_007_365G1_scaffold_708_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30017..30505
DNA (489bp) protein (163aa)
Molybdenum cofactor synthesis protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMA3_9FIRM
Molybdenum cofactor synthesis protein {ECO:0000313|EMBL:CDD78867.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
molybdopterin adenylyltransferase
L1_007_365G1_scaffold_708_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30672..31100
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCH6_9FIRM
Molybdenum cofactor synthesis domain-containing protein {ECO:0000313|EMBL:CDD78868.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_365G1_scaffold_708_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31250..32029
DNA (780bp) protein (260aa)
hydrolase, TatD family (EC:3.1.21.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76077.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_708_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32023..33477)
DNA (1455bp) protein (485aa)
Capsule biosynthesis protein capA n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFH3_9FIRM
Capsule biosynthesis protein capA {ECO:0000313|EMBL:CDD76078.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Bacterial capsule synthesis protein PGA_cap.
L1_007_365G1_scaffold_708_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33820..34257
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CCZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76079.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, MarR family
Displaying items 1-30 of 55 in total

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