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L1_007_365G1_scaffold_721

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_721_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1011..1547)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75693.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Nitroreductase
L1_007_365G1_scaffold_721_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1610..3052)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75692.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Putative peptidoglycan binding domain./L,D-transpeptidase catalytic domain.
L1_007_365G1_scaffold_721_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3374..4237)
DNA (864bp) protein (288aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH64_9FIRM
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EES75691.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_721_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4707..6842)
DNA (2136bp) protein (712aa)
Glycosidases (EC:3.2.1.20)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75690.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_721_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7194..9047)
DNA (1854bp) protein (618aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKB8_9FIRM
L1_007_365G1_scaffold_721_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9064..9594)
DNA (531bp) protein (177aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Ruminococcus RepID=R7CJQ2_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EQM98719.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_721_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9587..11044)
DNA (1458bp) protein (486aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH61_9FIRM
L1_007_365G1_scaffold_721_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11167..12660)
DNA (1494bp) protein (498aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Stage II sporulation protein E n=2 Tax=Ruminococcus RepID=C6JH60_9FIRM
Stage II sporulation protein E {ECO:0000313|EMBL:EES75687.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_721_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12847..13161)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CDF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76126.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Septum formation initiator.
L1_007_365G1_scaffold_721_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13122..13580)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76127.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Spore cortex biosynthesis protein, YabQ-like protein
L1_007_365G1_scaffold_721_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13584..13865)
DNA (282bp) protein (94aa)
Sporulation protein YabP n=2 Tax=Ruminococcus RepID=C6JH57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76128.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sporulation protein YabP
L1_007_365G1_scaffold_721_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14022..14261)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75683.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L1_007_365G1_scaffold_721_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14349..14627)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75682.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Bacterial nucleoid DNA-binding protein
L1_007_365G1_scaffold_721_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14767..15765)
DNA (999bp) protein (333aa)
CotS family spore coat protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH54_9FIRM
CotS family spore coat protein {ECO:0000313|EMBL:EES75681.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
CotS family spore coat protein
L1_007_365G1_scaffold_721_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15883..17208)
DNA (1326bp) protein (442aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.3.- 3.1.4.-)
Poly(A) polymerase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH53_9FIRM
Poly(A) polymerase {ECO:0000313|EMBL:EES75680.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_721_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17300..18739)
DNA (1440bp) protein (480aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH52_9FIRM
L1_007_365G1_scaffold_721_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19294..19785)
DNA (492bp) protein (164aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75678.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_721_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20010..20441)
DNA (432bp) protein (144aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
RpiB/LacA/LacB family sugar-phosphate isomerase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH50_9FIRM
RpiB/LacA/LacB family sugar-phosphate isomerase {ECO:0000313|EMBL:EES75677.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_721_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20574..21626)
DNA (1053bp) protein (351aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDF6_9FIRM
Sua5/YciO/YrdC/YwlC family protein
L1_007_365G1_scaffold_721_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21943..23088)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76137.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Listeria-Bacteroides repeat domain (List_Bact_rpt).
L1_007_365G1_scaffold_721_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23570..25807)
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75674.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Chlor_Arch_YYY domain
L1_007_365G1_scaffold_721_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25947..27959)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5M078_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98720.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_721_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28085..28780)
DNA (696bp) protein (232aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase CwlD n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH44_9FIRM
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:EES75671.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_721_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28945..30594)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75670.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted glycosyl hydrolase
L1_007_365G1_scaffold_721_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30905..31105)
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76142.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_365G1_scaffold_721_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31802..32548
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75668.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Negative regulator of genetic competence, sporulation and motility
L1_007_365G1_scaffold_721_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32713..32913)
DNA (201bp) protein (67aa)
Hydrid cluster protein-associated redox disulfide domain n=2 Tax=Ruminococcus RepID=C6JH40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76144.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Domain of unknown function (DUF1858).
L1_007_365G1_scaffold_721_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33015..33995)
DNA (981bp) protein (327aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76145.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
nucleoside ABC transporter membrane protein
L1_007_365G1_scaffold_721_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34008..35087)
DNA (1080bp) protein (360aa)
Inner-membrane translocator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDG5_9FIRM
Inner-membrane translocator {ECO:0000313|EMBL:CDD76146.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
nucleoside ABC transporter membrane protein
L1_007_365G1_scaffold_721_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35084..36619)
DNA (1536bp) protein (512aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76148.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Displaying items 1-30 of 60 in total

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