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L1_007_365G1_scaffold_826

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_826_1
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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306..1628
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZKP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA40233.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_826_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1947..2432
DNA (486bp) protein (162aa)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H904_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEU95541.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Acetyltransferase (GNAT) family.
L1_007_365G1_scaffold_826_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2514..3446)
DNA (933bp) protein (311aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K946_9FIRM
ATPase components of various ABC-type transport systems, contain duplicated ATPase
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDP23062.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_365G1_scaffold_826_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3447..4544)
DNA (1098bp) protein (366aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K945_9FIRM
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain {ECO:0000313|EMBL:CBL01358.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_365G1_scaffold_826_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4558..5661)
DNA (1104bp) protein (368aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S688_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDP23060.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_007_365G1_scaffold_826_6
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5663..6598)
DNA (936bp) protein (312aa)
ABC transporter permease protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q390_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC31158.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_007_365G1_scaffold_826_7
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6732..8438)
DNA (1707bp) protein (569aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QDP9_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDC31159.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type oligopeptide transport system, periplasmic component
L1_007_365G1_scaffold_826_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8972..10543)
DNA (1572bp) protein (524aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Ribonuclease Y n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H905_9FIRM
conserved hypothetical protein YmdA/YtgF
L1_007_365G1_scaffold_826_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10874..12634)
DNA (1761bp) protein (587aa)
LysR substrate binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H907_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EEU95544.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Transcriptional regulator
L1_007_365G1_scaffold_826_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12825..13193
DNA (369bp) protein (123aa)
Putative endoribonuclease L-PSP n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H908_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EEU95545.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
endoribonuclease L-PSP
L1_007_365G1_scaffold_826_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13331..14344
DNA (1014bp) protein (338aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
aspartate-ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H909_9FIRM
L1_007_365G1_scaffold_826_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14398..15060)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H910_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95547.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_826_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15057..15647)
DNA (591bp) protein (197aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EEU95548.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EEU95548.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H911_9FIRM
L1_007_365G1_scaffold_826_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15666..16991)
DNA (1326bp) protein (442aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SSU ribosomal protein S12P methylthiotransferase (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H912_9FIRM
L1_007_365G1_scaffold_826_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17106..17621)
DNA (516bp) protein (172aa)
Regulatory protein RecX n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H913_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_826_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17622..18803)
DNA (1182bp) protein (394aa)
Protein RecA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H914_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
RecA protein
L1_007_365G1_scaffold_826_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18930..19781)
DNA (852bp) protein (284aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:EEU95552.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEU95552.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H915_9FIRM
protein-(glutamine-N5) methyltransferase, release factor-specific
L1_007_365G1_scaffold_826_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19775..20722)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H916_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95553.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted metal-dependent enzyme
L1_007_365G1_scaffold_826_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20804..22225)
DNA (1422bp) protein (474aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H917_9FIRM
Signal transduction histidine kinase
L1_007_365G1_scaffold_826_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22307..23011)
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H918_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU95555.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_826_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23128..24432)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H919_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95556.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_826_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24732..25073)
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=2 Tax=Faecalibacterium prausnitzii RepID=D4JY86_9FIRM
LSU ribosomal protein L17P
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_826_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25099..26055)
DNA (957bp) protein (319aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H921_9FIRM
L1_007_365G1_scaffold_826_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26166..26768)
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H922_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SSU ribosomal protein S4P
L1_007_365G1_scaffold_826_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26789..27199)
DNA (411bp) protein (137aa)
30S ribosomal protein S11 n=3 Tax=Faecalibacterium prausnitzii RepID=D4JY83_9FIRM
SSU ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L1_007_365G1_scaffold_826_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27214..27585)
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=2 Tax=Faecalibacterium prausnitzii RepID=C7H924_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SSU ribosomal protein S13P
L1_007_365G1_scaffold_826_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27667..27780)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=5 Tax=Faecalibacterium prausnitzii RepID=D4JY81_9FIRM
LSU ribosomal protein L36P
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_365G1_scaffold_826_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27816..28220)
DNA (405bp) protein (135aa)
Translation initiation factor IF-1 n=2 Tax=root RepID=C7H926_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
translation initiation factor IF-1
L1_007_365G1_scaffold_826_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28451..29242)
DNA (792bp) protein (264aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H928_9FIRM
L1_007_365G1_scaffold_826_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29245..29877)
DNA (633bp) protein (211aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H929_9FIRM
Displaying items 1-30 of 78 in total

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