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L1_007_365G1_scaffold_859

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_859_1
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1225
DNA (1224bp) protein (408aa)
Transposase, Mutator family n=2 Tax=Coprococcus comes ATCC 27758 RepID=C0B9M8_9FIRM
Transposase, Mutator family {ECO:0000313|EMBL:EEG89980.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Transposase and inactivated derivatives
L1_007_365G1_scaffold_859_2
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1281..2630)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003661748
glycine cleavage T protein (aminomethyl transferase)
Glycine cleavage T protein (Aminomethyl transferase) {ECO:0000313|EMBL:ACL18387.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
L1_007_365G1_scaffold_859_3
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2651..3595)
DNA (945bp) protein (315aa)
NmrA family protein n=1 Tax=Enterococcus faecium PC4.1 RepID=D4W0T9_ENTFC
NmrA family protein {ECO:0000313|EMBL:EFF59987.1}; TaxID=791161 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium PC4.1.;"
NmrA-like protein
L1_007_365G1_scaffold_859_4
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3844..5391
DNA (1548bp) protein (516aa)
Putative uncharacterized protein n=1 Tax=Enterococcus faecium PC4.1 RepID=D4VY37_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EFF60931.1}; TaxID=791161 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium PC4.1.;"
hypothetical protein
L1_007_365G1_scaffold_859_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5477..6442)
DNA (966bp) protein (322aa)
Major facilitator superfamily MFS_1 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R7L4_CLOSW
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADL03743.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_007_365G1_scaffold_859_6
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6420..7403)
DNA (984bp) protein (328aa)
integrase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D93BB0
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK81672.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_365G1_scaffold_859_7
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7400..7603)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003124F09
HTH domain.
HTH domain {ECO:0000313|EMBL:CBK81671.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_365G1_scaffold_859_8
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7762..8367
DNA (606bp) protein (202aa)
DNA-binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DDAD99
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK81670.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_365G1_scaffold_859_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8393..9484
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83226.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_007_365G1_scaffold_859_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9776..10951
DNA (1176bp) protein (392aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8C8R6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23146.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_859_11
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10954..11484
DNA (531bp) protein (177aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46734.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L1_007_365G1_scaffold_859_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11617..12465
DNA (849bp) protein (283aa)
Transcriptional regulator, MerR family n=3 Tax=Clostridiales RepID=B0G6H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23144.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
putative MerR family transcriptional regulator
L1_007_365G1_scaffold_859_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12794..13321
DNA (528bp) protein (176aa)
Uncharacterized protein n=5 Tax=root RepID=B0G6H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23143.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_859_14
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13328..14029
DNA (702bp) protein (234aa)
Uncharacterized protein n=4 Tax=root RepID=B0G6H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88112.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L1_007_365G1_scaffold_859_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14139..15245
DNA (1107bp) protein (369aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R7G3H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23141.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_859_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15235..17205
DNA (1971bp) protein (657aa)
TraG/TraD family protein n=2 Tax=Clostridiales RepID=R7G2V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23140.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Type IV secretory pathway, VirD4 components
L1_007_365G1_scaffold_859_17
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17222..18148
DNA (927bp) protein (309aa)
Uncharacterized protein n=5 Tax=root RepID=B0G6G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46728.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L1_007_365G1_scaffold_859_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18644..21106)
DNA (2463bp) protein (821aa)
Efflux ABC transporter, permease protein n=4 Tax=root RepID=B0G6G6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23138.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ABC-type transport system, permease
L1_007_365G1_scaffold_859_19
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21106..21798)
DNA (693bp) protein (231aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridiales RepID=B0G6G5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG88117.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_859_20
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21873..22082)
DNA (210bp) protein (70aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=5 Tax=Clostridiales RepID=B0G6G4_9FIRM
hypothetical protein
L1_007_365G1_scaffold_859_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22094..23125)
DNA (1032bp) protein (344aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=5 Tax=Clostridiales RepID=B0G6G4_9FIRM
histidine kinase
L1_007_365G1_scaffold_859_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23098..23772)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=6 Tax=root RepID=B0G6G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23135.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
two component transcriptional regulator, winged helix family
L1_007_365G1_scaffold_859_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23998..24414)
DNA (417bp) protein (139aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23134.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_859_24
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24437..24670)
DNA (234bp) protein (78aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96972.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L1_007_365G1_scaffold_859_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24732..25061)
DNA (330bp) protein (110aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23132.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Protein of unknown function (DUF1648).
L1_007_365G1_scaffold_859_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25147..25860)
DNA (714bp) protein (238aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23131.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_859_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26016..26336)
DNA (321bp) protein (107aa)
DNA-binding helix-turn-helix protein n=5 Tax=Clostridiales RepID=B0G6F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23130.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
transcriptional regulator
L1_007_365G1_scaffold_859_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26776..27153
DNA (378bp) protein (126aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23129.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_859_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27172..27882
DNA (711bp) protein (237aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23128.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_859_30
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27898..28806
DNA (909bp) protein (303aa)
Uncharacterized protein n=5 Tax=root RepID=B0G6F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96965.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
Displaying items 1-30 of 39 in total

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