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L1_007_365G1_scaffold_902

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_902_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..990)
DNA (990bp) protein (330aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0S6_BIFBR
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase {ECO:0000313|EMBL:AHJ19812.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_365G1_scaffold_902_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(929..1153)
DNA (225bp) protein (75aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0S6_BIFBR
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase {ECO:0000313|EMBL:AHJ21609.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_902_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1380..2102)
DNA (723bp) protein (241aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:EFE88729.1}; EC=1.97.1.4 {ECO:0000313|EMBL:EFE88729.1};; Ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:BAR00522.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Bifidobacterium breve RepID=D4BR84_BIFBR
Anaerobic ribonucleoside-triphosphate reductase activating protein
L1_007_365G1_scaffold_902_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2251..4659)
DNA (2409bp) protein (803aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EFE88728.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EFE88728.1};; Ribonucleoside triphosphate reductase {ECO:0000313|EMBL:BAR00523.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
nrdD; Anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=Bifidobacterium breve RepID=F6C6D6_BIFBA
L1_007_365G1_scaffold_902_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5073..6428
DNA (1356bp) protein (452aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Exodeoxyribonuclease 7 large subunit n=2 Tax=Bifidobacterium breve RepID=D4BR82_BIFBR
Exodeoxyribonuclease VII large subunit
L1_007_365G1_scaffold_902_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6490..6780
DNA (291bp) protein (97aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0U9_BIFBR
Exodeoxyribonuclease VII small subunit
L1_007_365G1_scaffold_902_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6847..7371
DNA (525bp) protein (175aa)
Flavodoxin-like protein n=2 Tax=Bifidobacterium breve RepID=F6C6D9_BIFBA
NAD(P)H oxidoreductase
NAD(P)H oxidoreductase {ECO:0000313|EMBL:AHJ21614.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_902_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7507..9363)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A0T4_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75782.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
long chain fatty acid CoA ligase
L1_007_365G1_scaffold_902_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9500..10006)
DNA (507bp) protein (169aa)
Large-conductance mechanosensitive channel n=3 Tax=Bifidobacterium breve RepID=F9Y2P2_BIFBU
Large-conductance mechanosensitive channel
Large conductance mechanosensitive channel protein {ECO:0000313|EMBL:EPD75783.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_902_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10194..10622)
DNA (429bp) protein (143aa)
Nucleoside 2-deoxyribosyltransferase n=4 Tax=Bifidobacterium breve RepID=D4BR76_BIFBR
Hypothetical protein with nucleoside deoxyribosyltransferase (ntd) domain
Nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:EFE88721.1}; Putative nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:BAR00529.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_902_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10977..12116
DNA (1140bp) protein (380aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bifidobacterium breve RepID=F6C6E3_BIFBA
putative membrane spanning protein with Endonuclease/Exonuclease/phosphatase family domain
Putative membrane spanning protein with Endonuclease/Exonuclease/phosphatase family domain {ECO:0000313|EMBL:AHJ21618.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_902_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12150..13118)
DNA (969bp) protein (323aa)
Ppx/GppA phosphatase family protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6E4_BIFBA
Ppx/GppA phosphatase family protein
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:AEF27606.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_365G1_scaffold_902_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13171..14382)
DNA (1212bp) protein (404aa)
Aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II n=4 Tax=Bifidobacterium breve RepID=F6C6E5_BIFBA
Putative aminotransferase {ECO:0000313|EMBL:ERI87371.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_365G1_scaffold_902_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14481..15536
DNA (1056bp) protein (352aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bifidobacterium breve RepID=D4BR72_BIFBR
NAD-dependent oxidoreductase
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFE88717.1}; Putative oxidoreductase {ECO:0000313|EMBL:BAR00533.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_902_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15616..16068)
DNA (453bp) protein (151aa)
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:AEF28125.1}; EC=3.1.-.- {ECO:0000313|EMBL:AEF28125.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
DNA mismatch endonuclease Vsr n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6E7_BIFBA
vsr; DNA mismatch endonuclease, patch repair protein
L1_007_365G1_scaffold_902_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16223..16786
DNA (564bp) protein (188aa)
Acetyltransferase, GNAT family n=3 Tax=Bifidobacterium breve RepID=D4BR70_BIFBR
Acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFE88715.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_902_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16792..20868)
DNA (4077bp) protein (1359aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHA3_BIFBR
Helicase
Uncharacterized protein {ECO:0000313|EMBL:EPD75791.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_902_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21046..22065
DNA (1020bp) protein (340aa)
dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=3 Tax=Bifidobacterium breve RepID=F9Y2Q1_BIFBU
L1_007_365G1_scaffold_902_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22440..23732)
DNA (1293bp) protein (431aa)
gltA; Citrate synthase (EC:2.3.3.1)
Citrate synthase n=2 Tax=Bifidobacterium breve RepID=D4BR67_BIFBR
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_365G1_scaffold_902_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23944..24726)
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Methionine aminopeptidase n=5 Tax=Bifidobacterium breve RepID=F6C6F2_BIFBA
Methionine aminopeptidase
L1_007_365G1_scaffold_902_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24890..25774)
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CS78_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75795.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_902_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25939..28122
DNA (2184bp) protein (728aa)
Peptidase {ECO:0000313|EMBL:BAR00541.1}; Peptidase family M13 {ECO:0000313|EMBL:EFE88707.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFE88707.1};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Peptidase family M13 n=2 Tax=Bifidobacterium breve RepID=D4BR62_BIFBR
Zinc metalloprotease
L1_007_365G1_scaffold_902_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28192..28866)
DNA (675bp) protein (225aa)
single-stranded DNA-binding protein n=1 Tax=Bifidobacterium breve RepID=UPI000306A10F
Single-strand DNA binding protein
Single-strand DNA binding protein {ECO:0000313|EMBL:ABE96138.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_365G1_scaffold_902_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(29129..30832)
DNA (1704bp) protein (568aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Proline--tRNA ligase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6N0_BIFBA
Prolyl-tRNA synthetase
L1_007_365G1_scaffold_902_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30971..31840)
DNA (870bp) protein (290aa)
pyruvate formate lyase-activating protein n=1 Tax=Bifidobacterium breve RepID=UPI0002D9E8AB
Radical SAM domain protein {ECO:0000313|EMBL:EFE88704.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR00544.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Pyruvate formate-lyase activating enzyme
L1_007_365G1_scaffold_902_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32164..33582)
DNA (1419bp) protein (473aa)
ATP-dependent endonuclease n=1 Tax=Bifidobacterium breve RepID=UPI00037FB079
Helicase
Helicase {ECO:0000313|EMBL:AHJ21632.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_365G1_scaffold_902_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33708..34358)
DNA (651bp) protein (217aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Oligoribonuclease n=4 Tax=Bifidobacterium breve RepID=F6C6N3_BIFBA
Oligoribonuclease
Displaying 27 items

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