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L1_007_365G1_scaffold_953

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_953_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(631..3141)
DNA (2511bp) protein (837aa)
Efflux ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0GA50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75027.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type transport system, involved in lipoprotein release, permease component
L1_007_365G1_scaffold_953_2
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3476..7144)
DNA (3669bp) protein (1223aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI0003626B80
Uncharacterized protein {ECO:0000313|EMBL:EHR38807.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L1_007_365G1_scaffold_953_3
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7317..7700)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YP91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59362.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L1_007_365G1_scaffold_953_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7687..9183)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037387CA
Uncharacterized protein {ECO:0000313|EMBL:EGN33842.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Phage integrase family.
L1_007_365G1_scaffold_953_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9176..10921)
DNA (1746bp) protein (582aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035FF87C
Uncharacterized protein {ECO:0000313|EMBL:EGN33843.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_953_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10934..12049)
DNA (1116bp) protein (372aa)
recombinase n=1 Tax=Blautia producta RepID=UPI000378918F
Uncharacterized protein {ECO:0000313|EMBL:EGN33844.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_953_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12227..14137)
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000374D950
Uncharacterized protein {ECO:0000313|EMBL:CCZ68478.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Rad3-related DNA helicases
L1_007_365G1_scaffold_953_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14716..15147)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003640C97
Sigma-70, region 4 {ECO:0000313|EMBL:EEA80345.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Bacterial regulatory proteins, luxR family.
L1_007_365G1_scaffold_953_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(15543..16232)
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6RMT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46624.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_953_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(16257..17168)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000373ECA1
Uncharacterized protein {ECO:0000313|EMBL:CDC46623.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_953_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17238..19730)
DNA (2493bp) protein (831aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKM2_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEA83417.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type transport system, permease
L1_007_365G1_scaffold_953_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19727..20401)
DNA (675bp) protein (225aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKM1_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA83416.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_007_365G1_scaffold_953_13

Not on your lists

comp(20470..21237)
DNA (768bp) protein (256aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKM0_9CLOT
Signal transduction histidine kinase {ECO:0000313|EMBL:EKC79279.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Signal transduction histidine kinase
L1_007_365G1_scaffold_953_14

Not on your lists

comp(21558..22229)
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=3 Tax=root RepID=A5Z6V6_9FIRM
Two-component response regulator {ECO:0000313|EMBL:EKC68636.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Two-component response regulator
L1_007_365G1_scaffold_953_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22508..22783)
DNA (276bp) protein (92aa)
transcriptional regulator n=1 Tax=Blautia producta RepID=UPI0003801DA5
Uncharacterized protein {ECO:0000313|EMBL:EGN33861.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_953_16
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23086..23541)
DNA (456bp) protein (152aa)
Transposase IS200-family protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY93_ROSHA
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:AEN97681.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_953_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(23755..24354)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SJ38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46617.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type transport system, involved in lipoprotein release, permease component
L1_007_365G1_scaffold_953_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(24327..24929)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000373ECA1
Uncharacterized protein {ECO:0000313|EMBL:CDC46623.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_953_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(24926..26893)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SJ41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46622.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_953_20
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26907..27917)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RTU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75448.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ABC-type transport system, involved in lipoprotein release, permease component
L1_007_365G1_scaffold_953_21
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27910..29697)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YSS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65145.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_007_365G1_scaffold_953_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29807..30820)
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33852.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Signal transduction histidine kinase
L1_007_365G1_scaffold_953_23
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30817..31485)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90418.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_953_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31558..33939)
DNA (2382bp) protein (794aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33854.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
permease
L1_007_365G1_scaffold_953_25
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33945..36341)
DNA (2397bp) protein (799aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z578_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65127.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L1_007_365G1_scaffold_953_26

Not on your lists

comp(36354..37019)
DNA (666bp) protein (222aa)
ABC-type antimicrobial peptide transport system, ATPase component n=2 Tax=human gut metagenome RepID=K1TX52_9ZZZZ
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:EKC63816.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_007_365G1_scaffold_953_27
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37147..38178)
DNA (1032bp) protein (344aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
histidine kinase n=1 Tax=Blautia producta RepID=UPI00037C9612
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_953_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38175..38864)
DNA (690bp) protein (230aa)
transcriptional regulator n=1 Tax=Blautia producta RepID=UPI0003801DA5
Uncharacterized protein {ECO:0000313|EMBL:EGN33861.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_953_29
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39068..41449)
DNA (2382bp) protein (794aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RTY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75301.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ABC-type transport system, involved in lipoprotein release, permease component
L1_007_365G1_scaffold_953_30
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41464..42129)
DNA (666bp) protein (222aa)
ABC transporter ATP-binding protein n=1 Tax=Blautia producta RepID=UPI0003619C67
Uncharacterized protein {ECO:0000313|EMBL:EGC75300.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ABC-type antimicrobial peptide transport system, ATPase component
Displaying items 1-30 of 46 in total

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