ggKbase home page

L1_007_365G1_scaffold_151_6

Organism: L1_007_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 3142..3669

Top 3 Functional Annotations

Value Algorithm Source
RNase III regulator YmdB n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCP5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 175.0
  • Bit_score: 351
  • Evalue 3.90e-94
RNase III regulator YmdB {ECO:0000313|EMBL:CCZ78512.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 175.0
  • Bit_score: 351
  • Evalue 5.50e-94
RNA-directed RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 172.0
  • Bit_score: 331
  • Evalue 9.10e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia sp. CAG:18 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 528
ATGTACTTAATTAAGACTTTAATGGGAGATATAACAAAAGTAACAGATGTGCAGGCAATTGTGAATGCAGCAAACAACTCTCTTCTTGGCGGGGGCGGTGTAGATGGTGCGATTCATAGAGCAGCAGGACCGGAGCTTCTGGCGGAGTGCAGGACACTTCACGGATGTGAGACTGGAGAAGTAAAGATAACAAAAGCCTATAATCTGCCATGTGATTATGTGATACATACTGTAGGACCTATATGGAATGGTGGAAGGAATAGAGAAGAGGAACTTCTTGCTAACTGCTATTTTAATTCCATGAAGCTGGCAATGGATAATGGAATCAGGTCTATTGCATTTCCTTCCATATCAACTGGAGTATATAGTTTTCCGGTTGAGTTGGCAGCAAAGATTGCAGTACATACAGTAAACAGATTCTTGCAGGGTACTCCAGACAGCTTTGATTTGGTGGAATGGGTGCTGTTTGATACTCACACTGAATCAGTATACGAAGCAGAAGTTGATCAACTGTATAAAATGATATAA
PROTEIN sequence
Length: 176
MYLIKTLMGDITKVTDVQAIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLHGCETGEVKITKAYNLPCDYVIHTVGPIWNGGRNREEELLANCYFNSMKLAMDNGIRSIAFPSISTGVYSFPVELAAKIAVHTVNRFLQGTPDSFDLVEWVLFDTHTESVYEAEVDQLYKMI*