ggKbase home page

L1_007_365G1_scaffold_151

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_151_1
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..547
DNA (546bp) protein (182aa)
Putative efflux protein, MATE family n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L551_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL14746.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_151_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

597..1409
DNA (813bp) protein (271aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0GA39_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EDR45371.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
L1_007_365G1_scaffold_151_3
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1733..2419
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AM73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ30392.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L1_007_365G1_scaffold_151_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2424..2798
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=C4ZFA2_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89609.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_365G1_scaffold_151_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2800..3141
DNA (342bp) protein (114aa)
Arsenate reductase and related proteins, glutaredoxin family n=2 Tax=Roseburia RepID=D4L0W5_9FIRM
Arsenate reductase and related proteins, glutaredoxin family
Arsenate reductase and related proteins, glutaredoxin family {ECO:0000313|EMBL:CBL13255.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_365G1_scaffold_151_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3142..3669
DNA (528bp) protein (176aa)
RNase III regulator YmdB n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCP5_9FIRM
RNase III regulator YmdB {ECO:0000313|EMBL:CCZ78512.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RNA-directed RNA polymerase
L1_007_365G1_scaffold_151_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3697..3948
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BYI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19521.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_151_8
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3952..4782
DNA (831bp) protein (277aa)
Site-specific recombinase, phage integrase family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PID7_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERK50325.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_151_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4783..5529
DNA (747bp) protein (249aa)
Abi-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5W7_9FIRM
Abi-like protein {ECO:0000313|EMBL:CCZ78851.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_151_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5600..6109
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis L1-82 RepID=C7G6X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02440.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_007_365G1_scaffold_151_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6115..6750
DNA (636bp) protein (212aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis L1-82 RepID=C7G6X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02441.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
transposase for insertion sequence element
L1_007_365G1_scaffold_151_12
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7574..8077)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AWN2_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56623.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
Predicted transcriptional regulators
L1_007_365G1_scaffold_151_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8585..9937
DNA (1353bp) protein (451aa)
Helicase C-terminal domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKE5_9CLOT
Helicase C-terminal domain protein {ECO:0000313|EMBL:EEA83504.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA methylase
L1_007_365G1_scaffold_151_14
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10016..10738)
DNA (723bp) protein (241aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C432_9CLOT
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EEG72825.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
transcriptional regulator, GntR family
L1_007_365G1_scaffold_151_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10918..11913
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UBG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66312.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
draG; ADP-ribosylglycohydrolase
L1_007_365G1_scaffold_151_16
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11910..12806
DNA (897bp) protein (299aa)
Kinase, PfkB family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C430_9CLOT
Kinase, PfkB family {ECO:0000313|EMBL:EEG72823.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Sugar kinases, ribokinase family
L1_007_365G1_scaffold_151_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12843..13526
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WVM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08081.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
nicotinamide riboside transporter pnuC
L1_007_365G1_scaffold_151_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14046..15452)
DNA (1407bp) protein (469aa)
Transposase and inactivated derivatives n=1 Tax=Eubacterium rectale M104/1 RepID=D4JQJ2_9FIRM
Transposase and inactivated derivatives
Transposase and inactivated derivatives {ECO:0000313|EMBL:CBK95361.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_365G1_scaffold_151_19
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15907..18780
DNA (2874bp) protein (958aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6K2Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64446.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
putative helicase
L1_007_365G1_scaffold_151_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18846..19097
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48200.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
helicase
L1_007_365G1_scaffold_151_21
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19247..19438
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EDG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD99527.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L1_007_365G1_scaffold_151_22
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19458..21284
DNA (1827bp) protein (609aa)
hsdM; type I restriction-modification system, M subunit (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EB22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD99526.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L1_007_365G1_scaffold_151_23
Anaerococcus lactolyticus, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21281..22408
DNA (1128bp) protein (376aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Gardnerella vaginalis JCP8151A RepID=U6S7L4_GARVA
Uncharacterized protein {ECO:0000313|EMBL:KGF04396.1}; TaxID=1284686 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus lactolyticus S7-1-13.;"
hsdS2; type I restriction-modification system specificity subunit
L1_007_365G1_scaffold_151_24
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22435..25578
DNA (3144bp) protein (1048aa)
hsdR; type I restriction-modification system, R subunit (EC:3.1.21.3)
type I deoxyribonuclease HsdR n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B2F1D5
HsdR family type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EOS41676.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L1_007_365G1_scaffold_151_25
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25645..29343
DNA (3699bp) protein (1233aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VF21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO57772.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L1_007_365G1_scaffold_151_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29416..29931
DNA (516bp) protein (172aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULC4_9FIRM
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CCZ78850.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_151_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30044..30220
DNA (177bp) protein (59aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UT17_9FIRM
L1_007_365G1_scaffold_151_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30284..30739
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78848.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_151_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30800..31441
DNA (642bp) protein (214aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDJ2_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CCZ78847.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L1_007_365G1_scaffold_151_30
unknown

Not on your lists

31506..31703
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying items 1-30 of 99 in total

View Taxonomy