ggKbase home page

L1_007_365G1_scaffold_53_21

Organism: L1_007_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(24704..25483)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMF7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 259.0
  • Bit_score: 504
  • Evalue 4.10e-140
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 259.0
  • Bit_score: 504
  • Evalue 5.80e-140
RNA polymerase, sigma subunit, RpsG/SigG similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 257.0
  • Bit_score: 404
  • Evalue 1.60e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia sp. CAG:18 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 780
ATGTCTACGTACAAAGTTGAAATATGCGGGGTAAACACGGCCCAGCTGCCAATACTGAAAGAAGAAGAAAAGGAAGAACTTTTCAAAAAGATAAAAGCCGGCGACAAGGCATCCAGAGAAACCTACATCAAGGGAAATCTCCGGCTGGTATTATCCGTGATCAAACGGTTTAATAATCATAATGAAAATGTGGATGATCTGTTCCAGATTGGCTGTATCGGACTGATGAAGGCAATAGATAATTTTGATACGAGTGTCGGGGTGAAATTTTCCACCTATGCGGTTCCGATGATTATTGGTGAAATCCGCCGGTATCTGCGGGATAACAGCAGTTACCGCATTCCGCGTTCACTGCGTGATATTGCATATAAAGCCATGCAGGCAAAGGAACGGCTGGCAAAAAATGCGCAAAAGGAACCGACTCTCGAAGAGATTGCAGCCGAATGTGAGATTCCGGTGGAGGATGTGGTGTATGCCCTGGATGCCATCCAGACGCCCTTAAGTCTGTTTGATCCGGTCTATACGGATGGAGGGGACACCCTGTATGTGATGGATCAGATTTCGGACAAGAAAAACAAGGAAGAGCACTGGGTGGAGGATTTGTCACTTTCCGATGCCCTGTCACATCTGAATGAACGGGATGAGCATATCATCCGTCTGCGTTTTTTTGAGGGAAAGACACAGATTGAAGTCGCGGATGAAATTCATATTTCGCAGGCGCAGGTGTCGCGGCTGGAGAAAAATGCGTTAAAAAGTATGCAGGGGTATCTGCGTACATGA
PROTEIN sequence
Length: 260
MSTYKVEICGVNTAQLPILKEEEKEELFKKIKAGDKASRETYIKGNLRLVLSVIKRFNNHNENVDDLFQIGCIGLMKAIDNFDTSVGVKFSTYAVPMIIGEIRRYLRDNSSYRIPRSLRDIAYKAMQAKERLAKNAQKEPTLEEIAAECEIPVEDVVYALDAIQTPLSLFDPVYTDGGDTLYVMDQISDKKNKEEHWVEDLSLSDALSHLNERDEHIIRLRFFEGKTQIEVADEIHISQAQVSRLEKNALKSMQGYLRT*