ggKbase home page

L1_007_365G1_scaffold_1042

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1042_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..79
DNA (78bp) protein (26aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CTC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY33899.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_1042_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

112..897
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15365.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

904..1650
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BLK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15366.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1671..2474
DNA (804bp) protein (268aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
DNA modification methylase (EC:2.1.1.72)
DNA (Cytosine-5-)-methyltransferase n=2 Tax=Clostridiales RepID=A6BGC2_9FIRM
L1_007_365G1_scaffold_1042_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2556..2879
DNA (324bp) protein (108aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A6BGC1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD15368.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_1042_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3018..3188
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BJP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15369.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3167..3475
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63330.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
L1_007_365G1_scaffold_1042_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3482..4420
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BLK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15371.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Relaxase/Mobilisation nuclease domain.
L1_007_365G1_scaffold_1042_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4404..4526
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BLK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15371.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Relaxase/Mobilisation nuclease domain.
L1_007_365G1_scaffold_1042_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4529..5335
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15372.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5335..6315
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BJQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15373.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6399..6710
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BJP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15374.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6727..7005
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15375.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7023..7943
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BLL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15376.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Type IV secretory pathway, VirD4 components
L1_007_365G1_scaffold_1042_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8029..9891
DNA (1863bp) protein (621aa)
DNA recombinase, putative n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZE64_EUBR3
DNA recombinase, putative
DNA recombinase, putative {ECO:0000313|EMBL:ACR77327.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_365G1_scaffold_1042_16
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10212..11441
DNA (1230bp) protein (410aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A8SX58_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP25486.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
L1_007_365G1_scaffold_1042_17
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11444..12079
DNA (636bp) protein (212aa)
DNA primase n=4 Tax=Clostridiales RepID=C4ZE61_EUBR3
DNA primase
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EDP25487.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
L1_007_365G1_scaffold_1042_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12033..13319
DNA (1287bp) protein (429aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=V8BKR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15380.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_19
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13586..13750
DNA (165bp) protein (55aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A7VFY5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK82242.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L1_007_365G1_scaffold_1042_20
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13863..14309
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO57412.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L1_007_365G1_scaffold_1042_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14481..15284
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BJR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15383.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Type IV secretory pathway, VirD4 components
L1_007_365G1_scaffold_1042_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15315..15689
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=V8BJR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15384.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15777..16619
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15385.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_24
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16624..17055
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A6BGA9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK79753.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_365G1_scaffold_1042_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17059..17499
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15387.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17492..19822
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BJS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15388.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Domain of unknown function DUF87.
L1_007_365G1_scaffold_1042_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19822..20172
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BJR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15389.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20202..21893
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15390.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
CHAP domain.
L1_007_365G1_scaffold_1042_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21986..22327
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B6FU75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETD15391.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1042_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22403..23389
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15392.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy