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L1_007_365G1_scaffold_1215

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1215_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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142..588
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22950.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1215_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

969..1220
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CS82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY31908.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L1_007_365G1_scaffold_1215_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1222..1497
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22954.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
SEC-C domain-containing protein
L1_007_365G1_scaffold_1215_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1502..1786
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22955.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_1215_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1850..2875
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C8A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22956.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1215_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2872..3006
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CPK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32798.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_1215_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3335..4816
DNA (1482bp) protein (494aa)
Lysine decarboxylase {ECO:0000313|EMBL:EDY32797.1}; EC=4.1.1.18 {ECO:0000313|EMBL:EDY32797.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
arginine decarboxylase (EC:4.1.1.19)
Lysine decarboxylase n=2 Tax=Ruminococcus lactaris RepID=B5CPK5_9FIRM
L1_007_365G1_scaffold_1215_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4800..5651
DNA (852bp) protein (284aa)
Spermidine synthase n=2 Tax=Ruminococcus lactaris RepID=B5CPK4_9FIRM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
spermidine synthase
L1_007_365G1_scaffold_1215_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5655..6509
DNA (855bp) protein (285aa)
agmatinase (EC:3.5.3.11)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CPK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32795.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_1215_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6604..7863
DNA (1260bp) protein (420aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CPK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32794.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
saccharopine dehydrogenase
L1_007_365G1_scaffold_1215_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7869..9077
DNA (1209bp) protein (403aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CPK1_9FIRM
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:EDY32793.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_1215_12
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9123..9389
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XMN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05597.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Virulence protein
L1_007_365G1_scaffold_1215_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9708..10130
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22962.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1215_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10133..11392
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22963.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1215_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11771..12157
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22964.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_365G1_scaffold_1215_16
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12355..12543
DNA (189bp) protein (63aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R6TI56_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC69409.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_365G1_scaffold_1215_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12540..12653
DNA (114bp) protein (38aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R6TI56_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93758.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_365G1_scaffold_1215_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12650..12787
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C8B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22966.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1215_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12947..13414
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22967.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
peptidase M16C associated domain-containing protein
L1_007_365G1_scaffold_1215_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13474..15606
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22968.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Sulfate permease and related transporters (MFS superfamily)
L1_007_365G1_scaffold_1215_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15603..16934
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CPJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32787.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
diguanylate cyclase (GGDEF) domain
L1_007_365G1_scaffold_1215_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17027..18256)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C8C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22971.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_1215_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18438..19811
DNA (1374bp) protein (458aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CPJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22972.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_1215_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20001..20825
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=V8C6F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22973.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
rRNA methylases
Displaying 24 items

View Taxonomy