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L1_007_365G1_scaffold_1614

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1614_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(3..143)
DNA (141bp) protein (47aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERD0_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDB03158.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_365G1_scaffold_1614_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(140..469)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CQQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32482.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L1_007_365G1_scaffold_1614_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(576..1790)
DNA (1215bp) protein (405aa)
threonine dehydratase, medium form (EC:4.3.1.19)
Threonine ammonia-lyase n=2 Tax=Ruminococcus lactaris RepID=B5CQQ4_9FIRM
Threonine ammonia-lyase {ECO:0000313|EMBL:ETD15460.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_1614_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1768..2727)
DNA (960bp) protein (320aa)
Signal recognition particle receptor FtsY n=2 Tax=Ruminococcus lactaris RepID=B5CQQ3_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
signal recognition particle-docking protein FtsY
L1_007_365G1_scaffold_1614_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2737..6297)
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQQ2_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
condensin subunit Smc
L1_007_365G1_scaffold_1614_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6309..6998)
DNA (690bp) protein (230aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=2 Tax=Ruminococcus lactaris RepID=B5CQQ1_9FIRM
L1_007_365G1_scaffold_1614_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7077..7307)
DNA (231bp) protein (77aa)
Acyl carrier protein n=2 Tax=Ruminococcus lactaris RepID=B5CQQ0_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
acyl carrier protein
L1_007_365G1_scaffold_1614_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7325..8356)
DNA (1032bp) protein (344aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Phosphate acyltransferase n=2 Tax=Ruminococcus lactaris RepID=B5CQP9_9FIRM
phosphate:acyl-[acyl carrier protein] acyltransferase
L1_007_365G1_scaffold_1614_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8506..8685)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=2 Tax=Ruminococcus lactaris RepID=B5CQP8_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ribosomal protein L32
L1_007_365G1_scaffold_1614_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8689..9216)
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=V8BJZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15453.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Predicted metal-binding, possibly nucleic acid-binding protein
L1_007_365G1_scaffold_1614_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9391..10587)
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BL20_9FIRM
L1_007_365G1_scaffold_1614_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10629..11624)
DNA (996bp) protein (332aa)
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BLX4_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:ETD15451.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_1614_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11824..13176)
DNA (1353bp) protein (451aa)
Magnesium transporter n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKZ3_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
magnesium transporter
L1_007_365G1_scaffold_1614_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13293..14579
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BK14_9FIRM
UPF0348 protein HMPREF1202_02681 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Predicted nucleotidyltransferase
Displaying 14 items

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