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L1_007_365G1_scaffold_324

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Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_324_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..526
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CDC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25413.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Predicted transcriptional regulators
L1_007_365G1_scaffold_324_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

557..1594
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CE96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25412.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_324_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2011..3204)
DNA (1194bp) protein (398aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CFA3_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_324_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3328..5445)
DNA (2118bp) protein (706aa)
Elongation factor G n=2 Tax=Ruminococcus lactaris RepID=V8CEG6_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
elongation factor G
L1_007_365G1_scaffold_324_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5467..5937)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=2 Tax=Ruminococcus RepID=R6PGW3_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
30S ribosomal protein S7
L1_007_365G1_scaffold_324_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6147..6569)
DNA (423bp) protein (141aa)
30S ribosomal protein S12 n=4 Tax=Clostridiales RepID=B5CT53_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
SSU ribosomal protein S12P
L1_007_365G1_scaffold_324_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6923..8359)
DNA (1437bp) protein (479aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CT54_9FIRM
L1_007_365G1_scaffold_324_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8756..9889)
DNA (1134bp) protein (378aa)
Toxic anion resistance protein TelA n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CT55_9FIRM
Toxic anion resistance protein TelA {ECO:0000313|EMBL:EDY31477.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Uncharacterized protein involved in tellurite resistance
L1_007_365G1_scaffold_324_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9912..11177)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CT56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY31478.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
L1_007_365G1_scaffold_324_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11290..11982
DNA (693bp) protein (231aa)
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EDY31479.1}; EC=5.4.99.- {ECO:0000313|EMBL:EDY31479.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase, RluA family n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CT57_9FIRM
L1_007_365G1_scaffold_324_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12134..12421)
DNA (288bp) protein (96aa)
Putative septation protein SpoVG n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CT58_9FIRM
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Uncharacterized protein, involved in the regulation of septum location
L1_007_365G1_scaffold_324_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12458..13576)
DNA (1119bp) protein (373aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CT59_9FIRM
L1_007_365G1_scaffold_324_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13573..14847)
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CT60_9FIRM
L1_007_365G1_scaffold_324_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15128..16504
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=2 Tax=Ruminococcus lactaris RepID=B5CT61_9FIRM
L1_007_365G1_scaffold_324_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16816..17934
DNA (1119bp) protein (373aa)
DnaD domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CT62_9FIRM
DnaD domain protein {ECO:0000313|EMBL:EDY31484.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
DnaD and phage-associated domain
L1_007_365G1_scaffold_324_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18012..18998
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=V8CDA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25398.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
replicative DNA helicase loader DnaI
L1_007_365G1_scaffold_324_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19009..20193
DNA (1185bp) protein (395aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EDY31486.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EDY31486.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=2 Tax=Ruminococcus lactaris RepID=B5CT64_9FIRM
L1_007_365G1_scaffold_324_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20348..21424
DNA (1077bp) protein (359aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CF86_9FIRM
L1_007_365G1_scaffold_324_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21427..22137
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CEE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25395.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
winged helix family two component transcriptional regulator
L1_007_365G1_scaffold_324_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22247..22390
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CT67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY31489.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_324_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22531..23253)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CT68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25393.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_324_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23299..24312)
DNA (1014bp) protein (338aa)
Sugar-binding domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CT69_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EDY31491.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L1_007_365G1_scaffold_324_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24332..25306)
DNA (975bp) protein (325aa)
Sugar-binding domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CT70_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EDY31492.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L1_007_365G1_scaffold_324_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25290..27182)
DNA (1893bp) protein (631aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CEE5_9FIRM
L1_007_365G1_scaffold_324_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27262..28857)
DNA (1596bp) protein (532aa)
Response regulator receiver domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CT72_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDY31494.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
two component transcriptional regulator, AraC family
L1_007_365G1_scaffold_324_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29069..30721)
DNA (1653bp) protein (551aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Ruminococcus lactaris RepID=B5CT74_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDY31496.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L1_007_365G1_scaffold_324_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30740..32248)
DNA (1509bp) protein (503aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=2 Tax=Ruminococcus lactaris RepID=B5CT75_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDY31497.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_324_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32338..33609)
DNA (1272bp) protein (424aa)
Galactose/glucose-binding lipoprotein family protein n=2 Tax=Ruminococcus lactaris RepID=B5CT76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25386.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L1_007_365G1_scaffold_324_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33989..37705)
DNA (3717bp) protein (1239aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Ruminococcus lactaris RepID=B5CT77_9FIRM
L1_007_365G1_scaffold_324_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37724..41587)
DNA (3864bp) protein (1288aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=2 Tax=root RepID=B5CT78_9FIRM
Displaying items 1-30 of 58 in total

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