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L1_007_365G1_scaffold_514

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_514_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(97..1428)
DNA (1332bp) protein (444aa)
Magnesium transporter n=2 Tax=Ruminococcus lactaris RepID=B5CSG6_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Mg2+ transporter (mgtE)
L1_007_365G1_scaffold_514_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2017..3474
DNA (1458bp) protein (486aa)
pepD; Xaa-His dipeptidase family protein (EC:3.4.13.20)
Xaa-His dipeptidase n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CSG8_9FIRM
Xaa-His dipeptidase {ECO:0000313|EMBL:EDY31782.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_514_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3658..4017)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CSH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY31784.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L1_007_365G1_scaffold_514_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4017..4370)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CSH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY31785.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Coenzyme PQQ synthesis protein D (PqqD).
L1_007_365G1_scaffold_514_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4378..6279)
DNA (1902bp) protein (634aa)
Oligopeptide transporter, OPT family n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CSH2_9FIRM
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:EDY31786.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
oligopeptide transporter family protein
L1_007_365G1_scaffold_514_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6545..7315
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CAC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24324.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_007_365G1_scaffold_514_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7350..8225
DNA (876bp) protein (292aa)
33 kDa chaperonin n=2 Tax=Ruminococcus lactaris RepID=B5CSH4_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Disulfide bond chaperones of the HSP33 family
L1_007_365G1_scaffold_514_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8310..10220
DNA (1911bp) protein (637aa)
NAD+ synthase {ECO:0000313|EMBL:EDY31789.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EDY31789.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthase n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CSH5_9FIRM
L1_007_365G1_scaffold_514_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10394..10768)
DNA (375bp) protein (125aa)
Putative endoribonuclease L-PSP n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CSH6_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EDY31790.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
endoribonuclease L-PSP
L1_007_365G1_scaffold_514_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10954..12315
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CSH7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDY31791.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_514_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12350..13678)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CAC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24329.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_514_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13990..15129
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CSH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24330.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_514_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15266..15436)
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CSI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY31795.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L1_007_365G1_scaffold_514_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15926..16939
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CB47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24332.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ribose operon repressor, putative
L1_007_365G1_scaffold_514_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17046..17504
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CA87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24333.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
PTS family mannose/fructose/sorbose porter component IIB
L1_007_365G1_scaffold_514_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17578..18372
DNA (795bp) protein (265aa)
PTS system sorbose-specific iic component n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CSI4_9FIRM
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EDY31798.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
pts; PTS family mannose/fructose/sorbose porter component IIC
L1_007_365G1_scaffold_514_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18365..19240
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CBE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24335.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
PTS family mannose/fructose/sorbose porter component IID
L1_007_365G1_scaffold_514_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19260..19676
DNA (417bp) protein (139aa)
PTS system fructose IIA component n=2 Tax=Ruminococcus lactaris RepID=B5CSI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24336.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
PTS system mannose/fructose-specific transporter subunit IIA
L1_007_365G1_scaffold_514_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19669..21351
DNA (1683bp) protein (561aa)
malL; oligo-1,6-glucosidase (oligosaccharide alpha-1,6-glucosidase) (Sucrase-isomaltase) (Isomaltase) (Dextrin 6-alpha-D-glucanohydrolase) (EC:3.2.1.10)
Alpha amylase, catalytic domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CSI7_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDY31801.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_514_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21519..22133)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CA90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24338.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Lysophospholipase L1 and related esterases
L1_007_365G1_scaffold_514_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22591..23520
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CAD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24339.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L1_007_365G1_scaffold_514_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23521..24477
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=2 Tax=Ruminococcus lactaris RepID=B5CSJ1_9FIRM
L1_007_365G1_scaffold_514_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24503..25252
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=2 Tax=Ruminococcus lactaris RepID=B5CSJ2_9FIRM
L1_007_365G1_scaffold_514_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25309..26466
DNA (1158bp) protein (386aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CB56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24342.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_514_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26494..27687
DNA (1194bp) protein (398aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
tRNA sulfurtransferase ThiI n=2 Tax=Ruminococcus lactaris RepID=V8CA94_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
L1_007_365G1_scaffold_514_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27836..28069)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CSJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY31809.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
PTS HPr component phosphorylation site.
L1_007_365G1_scaffold_514_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28183..29499
DNA (1317bp) protein (439aa)
tRNA methylthiotransferase YqeV n=2 Tax=Ruminococcus lactaris RepID=B5CSJ6_9FIRM
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EDY31810.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
MiaB-like tRNA modifying enzyme
L1_007_365G1_scaffold_514_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29634..29897
DNA (264bp) protein (88aa)
UPF0297 protein RUMLAC_02457 n=2 Tax=Ruminococcus lactaris RepID=B5CSJ7_9FIRM
UPF0297 protein RUMLAC_02457 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L1_007_365G1_scaffold_514_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29905..30351
DNA (447bp) protein (149aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
YqgF family RNAse H domain-containing protein n=2 Tax=Ruminococcus lactaris RepID=V8CB63_9FIRM
conserved hypothetical protein TIGR00250
L1_007_365G1_scaffold_514_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30338..30598
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CSJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY31813.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Protein of unknown function (DUF1292).
Displaying items 1-30 of 69 in total

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