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L1_007_365G1_scaffold_584

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_584_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..250
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=D4JBJ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27497.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_365G1_scaffold_584_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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381..1193
DNA (813bp) protein (271aa)
Putative transcriptional regulatory protein WalR n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QH04_9FIRM
Putative transcriptional regulatory protein WalR {ECO:0000313|EMBL:ERK40593.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
two-component response regulator
L1_007_365G1_scaffold_584_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1194..2126
DNA (933bp) protein (311aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QP98_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERK40592.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Signal transduction histidine kinase
L1_007_365G1_scaffold_584_4
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2190..3101
DNA (912bp) protein (304aa)
ABC-type multidrug transport system, ATPase component n=5 Tax=root RepID=D4JBJ4_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBK81715.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_365G1_scaffold_584_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3103..3795
DNA (693bp) protein (231aa)
Uncharacterized protein n=7 Tax=root RepID=B0G8N2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27500.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_365G1_scaffold_584_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3963..4202)
DNA (240bp) protein (80aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=U2PA76_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERK40589.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L1_007_365G1_scaffold_584_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4539..4964
DNA (426bp) protein (142aa)
Toxin-antitoxin system, antitoxin component, HicB family n=2 Tax=Ruminococcus lactaris RepID=B5CQH7_9FIRM
Toxin-antitoxin system, antitoxin component, HicB family {ECO:0000313|EMBL:EDY32496.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L1_007_365G1_scaffold_584_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5350..7449
DNA (2100bp) protein (700aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Ruminococcus lactaris RepID=B5CNV7_9FIRM
L1_007_365G1_scaffold_584_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7479..9347
DNA (1869bp) protein (623aa)
UvrABC system protein C n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNV8_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
excinuclease ABC, C subunit
L1_007_365G1_scaffold_584_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9394..10323
DNA (930bp) protein (310aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.4.- 2.7.11.-)
HPr kinase/phosphorylase n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNV9_9FIRM
L1_007_365G1_scaffold_584_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10385..11320
DNA (936bp) protein (312aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=2 Tax=Ruminococcus lactaris RepID=B5CNW0_9FIRM
ROK family protein {ECO:0000313|EMBL:EDY32866.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_584_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11426..13924)
DNA (2499bp) protein (833aa)
penicillin-binding protein, 1A family (EC:2.4.1.- 3.4.-.-)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=V8BSM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17810.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_584_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14101..14766
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BTJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17811.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
conserved hypothetical protein TIGR00257
L1_007_365G1_scaffold_584_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14943..15503)
DNA (561bp) protein (187aa)
Ribosomal subunit interface protein n=2 Tax=Ruminococcus lactaris RepID=B5CNW3_9FIRM
Ribosomal subunit interface protein {ECO:0000313|EMBL:ETD17812.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ribosomal subunit interface protein
L1_007_365G1_scaffold_584_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15699..17528)
DNA (1830bp) protein (610aa)
GTP-binding protein TypA n=2 Tax=Ruminococcus lactaris RepID=B5CNW4_9FIRM
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:ETD17813.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
GTP-binding protein TypA/BipA
L1_007_365G1_scaffold_584_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17912..21928
DNA (4017bp) protein (1339aa)
Repeat protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNW5_9FIRM
Repeat protein {ECO:0000313|EMBL:EDY32871.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L1_007_365G1_scaffold_584_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22158..22790
DNA (633bp) protein (211aa)
Single-strand binding family protein n=2 Tax=Ruminococcus lactaris RepID=B5CNW6_9FIRM
Single-strand binding family protein {ECO:0000313|EMBL:EDY32872.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Single-stranded DNA-binding protein
L1_007_365G1_scaffold_584_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22967..23725
DNA (759bp) protein (253aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNW7_9FIRM
L1_007_365G1_scaffold_584_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23794..23955
DNA (162bp) protein (54aa)
hypothetical protein (EC:3.1.3.11)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=V8BRJ7_9FIRM
Putative Fructose-1,6-bisphosphatase class 3 2 {ECO:0000313|EMBL:EDY32874.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_584_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23968..24321
DNA (354bp) protein (118aa)
hypothetical protein (EC:3.1.3.11)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BRS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17819.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_584_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24334..25173
DNA (840bp) protein (280aa)
RNA polymerase sigma factor n=2 Tax=Ruminococcus lactaris RepID=B5CNX1_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
RNA polymerase, sigma 70 subunit, RpoD
L1_007_365G1_scaffold_584_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25343..25702
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CNX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32878.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_365G1_scaffold_584_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25798..26583
DNA (786bp) protein (262aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type (EC:5.3.1.16)
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BSQ1_9FIRM
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000313|EMBL:ETD17822.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_584_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26686..29262
DNA (2577bp) protein (859aa)
Protein translocase subunit SecA n=2 Tax=Ruminococcus lactaris RepID=B5CNX4_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
protein translocase subunit secA
L1_007_365G1_scaffold_584_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29292..29387
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BRT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17824.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_584_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29419..30438
DNA (1020bp) protein (340aa)
Peptide chain release factor 2 n=2 Tax=Ruminococcus lactaris RepID=B5CNX5_9FIRM
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
bacterial peptide chain release factor 2 (bRF-2)
L1_007_365G1_scaffold_584_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30435..31652
DNA (1218bp) protein (406aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=2 Tax=Ruminococcus lactaris RepID=B5CNX6_9FIRM
L1_007_365G1_scaffold_584_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31809..32183)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BSQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17827.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Helix-turn-helix.
L1_007_365G1_scaffold_584_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32322..32843)
DNA (522bp) protein (174aa)
Adenylate cyclase n=2 Tax=Ruminococcus lactaris RepID=B5CNX8_9FIRM
Adenylate cyclase {ECO:0000313|EMBL:EDY32884.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
adenylate cyclase
L1_007_365G1_scaffold_584_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32999..33541
DNA (543bp) protein (181aa)
DJ-1 family protein n=2 Tax=Ruminococcus lactaris RepID=B5CNX9_9FIRM
DJ-1 family protein {ECO:0000313|EMBL:EDY32885.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
DJ-1 family protein
Displaying items 1-30 of 42 in total

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