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L1_007_365G1_scaffold_860

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_860_1
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20..262
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YYV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62942.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L1_007_365G1_scaffold_860_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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392..1534
DNA (1143bp) protein (381aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Cytosine-specific methyltransferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AIY8_9CLOT
modification methylase
L1_007_365G1_scaffold_860_3
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1516..2757
DNA (1242bp) protein (414aa)
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:EGZ45988.1}; EC=3.1.21.4 {ECO:0000313|EMBL:EGZ45988.1};; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
ecoRIIR; type II restriction enzyme (EC:3.1.21.4)
Type II site-specific deoxyribonuclease n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E5I7_9GAMM
L1_007_365G1_scaffold_860_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2760..3209
DNA (450bp) protein (150aa)
Patch repair protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B3M2_9CLOT
Patch repair protein {ECO:0000313|EMBL:CDD58347.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
DNA mismatch endonuclease Vsr
L1_007_365G1_scaffold_860_5
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3364..3582
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5W9V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92511.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hypothetical protein
L1_007_365G1_scaffold_860_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3598..5721
DNA (2124bp) protein (708aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66218.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L1_007_365G1_scaffold_860_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5930..6154
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CDD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25423.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_860_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6528..7133
DNA (606bp) protein (202aa)
HDIG domain protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CT37_9FIRM
HDIG domain protein {ECO:0000313|EMBL:EDY31459.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Predicted hydrolase (HD superfamily)
L1_007_365G1_scaffold_860_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7430..12565
DNA (5136bp) protein (1712aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CFC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25426.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_860_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12655..13743)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CEB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25427.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L1_007_365G1_scaffold_860_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14041..14787
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CDE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25428.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_860_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14804..18427
DNA (3624bp) protein (1208aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CDK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25429.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_860_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18523..22284
DNA (3762bp) protein (1254aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CEK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25430.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
cell wall surface anchor family protein
L1_007_365G1_scaffold_860_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22389..23318)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CFD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25431.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_860_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23637..29519
DNA (5883bp) protein (1961aa)
1,2-A-L-fucosidase (EC:3.2.1.51)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CEC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25432.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_860_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29630..30463)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CDG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25433.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_860_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30796..31590
DNA (795bp) protein (265aa)
Carbohydrate ABC transporter substrate-binding protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CDM2_9FIRM
Carbohydrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETD25434.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
carbohydrate ABC transporter substrate-binding protein
Displaying 17 items

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