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L1_007_365G1_scaffold_8

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Displaying items 1-30 of 270 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_8_1
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1883
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DM11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81253.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_8_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2311..3576
DNA (1266bp) protein (422aa)
Predicted Zn-dependent peptidases n=2 Tax=root RepID=D4L7T0_9FIRM
Predicted Zn-dependent peptidases
Predicted Zn-dependent peptidases {ECO:0000313|EMBL:CBL15675.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_8_3
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3591..4868
DNA (1278bp) protein (426aa)
Predicted Zn-dependent peptidases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7T1_9FIRM
Predicted Zn-dependent peptidases
Predicted Zn-dependent peptidases {ECO:0000313|EMBL:CBL15676.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_8_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5679..6530
DNA (852bp) protein (284aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=2 Tax=root RepID=R5DLX5_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_365G1_scaffold_8_5

Not on your lists


6666..6974
DNA (309bp) protein (103aa)
Ribosomal protein L21 n=2 Tax=root RepID=K1SI57_9ZZZZ
Ribosomal protein L21 {ECO:0000313|EMBL:EKC53465.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
LSU ribosomal protein L21P
L1_007_365G1_scaffold_8_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6977..7294
DNA (318bp) protein (106aa)
Predicted ribosomal protein n=2 Tax=Ruminococcus RepID=D4L7T5_9FIRM
Predicted ribosomal protein
Predicted ribosomal protein {ECO:0000313|EMBL:CBL15680.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_8_7
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7299..7583
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=2 Tax=Ruminococcus RepID=D4L7T6_9FIRM
LSU ribosomal protein L27P
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_8_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7718..8989
DNA (1272bp) protein (424aa)
GTPase Obg n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DR02_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Obg family GTPase CgtA
L1_007_365G1_scaffold_8_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9012..9413
DNA (402bp) protein (134aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Mini-ribonuclease 3 n=2 Tax=Ruminococcus RepID=D4L7T8_9FIRM
hypothetical protein
L1_007_365G1_scaffold_8_10
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9418..10311
DNA (894bp) protein (298aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DX69_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCX81242.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_8_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10363..11427)
DNA (1065bp) protein (355aa)
GtrA-like protein./Glycosyl transferase family 2 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZ16_9FIRM
GtrA-like protein./Glycosyl transferase family 2 {ECO:0000313|EMBL:CCX81241.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
GtrA-like protein./Glycosyl transferase family 2.
L1_007_365G1_scaffold_8_12
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11701..13368
DNA (1668bp) protein (556aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Alpha-amylase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLW8_9FIRM
Glycosidases
L1_007_365G1_scaffold_8_13
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13580..14398
DNA (819bp) protein (273aa)
SseB protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7U1_9FIRM
SseB protein.
SseB protein {ECO:0000313|EMBL:CBL15686.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_8_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14639..16843
DNA (2205bp) protein (735aa)
Dockerin type I repeat n=2 Tax=root RepID=R5DX64_9FIRM
Dockerin type I repeat {ECO:0000313|EMBL:CCX81237.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Dockerin type I repeat.
L1_007_365G1_scaffold_8_15
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16927..17682)
DNA (756bp) protein (252aa)
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013, ECO:0000313|EMBL:CBL15688.1};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Imidazole glycerol phosphate synthase subunit HisF n=3 Tax=root RepID=D4L7U3_9FIRM
L1_007_365G1_scaffold_8_16
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17685..18308)
DNA (624bp) protein (208aa)
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:CBL15689.1};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7U4_9FIRM
L1_007_365G1_scaffold_8_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18519..19415
DNA (897bp) protein (299aa)
Transcriptional regulator, RpiR family n=2 Tax=Ruminococcus RepID=D4L7U5_9FIRM
transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CBL15690.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_8_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19405..20643
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81233.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
conserved hypothetical protein TIGR00275
L1_007_365G1_scaffold_8_19
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20685..21353
DNA (669bp) protein (223aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000313|EMBL:CBL15692.1}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Cytidylate kinase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7U7_9FIRM
L1_007_365G1_scaffold_8_20
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21353..21988
DNA (636bp) protein (212aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CBL15693.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CBL15693.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7U8_9FIRM
L1_007_365G1_scaffold_8_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21969..23939
DNA (1971bp) protein (657aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQY7_9FIRM
hydroxymethylbutenyl pyrophosphate reductase
L1_007_365G1_scaffold_8_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24007..25335
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81228.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_8_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25395..26129)
DNA (735bp) protein (245aa)
Probable transcriptional regulatory protein BN462_01691 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZ02_9FIRM
Probable transcriptional regulatory protein BN462_01691 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
conserved hypothetical protein TIGR01033
L1_007_365G1_scaffold_8_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26360..27244
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=root RepID=R5DQY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81224.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
conserved hypothetical protein TIGR00255
L1_007_365G1_scaffold_8_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27254..27511
DNA (258bp) protein (86aa)
UPF0296 protein BN462_01689 n=2 Tax=root RepID=R5DX46_9FIRM
UPF0296 protein BN462_01689 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_8_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27501..28082
DNA (582bp) protein (194aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Guanylate kinase n=2 Tax=Ruminococcus RepID=D4L7V3_9FIRM
L1_007_365G1_scaffold_8_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28128..28334
DNA (207bp) protein (69aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
DNA-directed RNA polymerase subunit omega n=2 Tax=Ruminococcus RepID=D4L7V4_9FIRM
DNA-directed RNA polymerase, omega subunit
L1_007_365G1_scaffold_8_28
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28294..30771
DNA (2478bp) protein (826aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
primosomal protein N' (EC:3.6.1.-)
Primosomal protein N' n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7V5_9FIRM
L1_007_365G1_scaffold_8_29
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30788..31264
DNA (477bp) protein (159aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Peptide deformylase n=2 Tax=Ruminococcus RepID=D4L7V6_9FIRM
L1_007_365G1_scaffold_8_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31280..32197
DNA (918bp) protein (306aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Methionyl-tRNA formyltransferase n=2 Tax=root RepID=D4L7V7_9FIRM
Displaying items 1-30 of 270 in total

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