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L1_007_365G1_scaffold_447

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Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_447_1
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..433
DNA (432bp) protein (144aa)
Bacterial surface proteins containing Ig-like domains n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5P0_9FIRM
Bacterial surface proteins containing Ig-like domains
Bacterial surface proteins containing Ig-like domains {ECO:0000313|EMBL:CBL14935.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_447_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(489..698)
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTR9_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCX83523.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Helix-turn-helix.
L1_007_365G1_scaffold_447_3
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1163..1483
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L4S5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14620.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_447_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1971..3707)
DNA (1737bp) protein (579aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123, ECO:0000313|EMBL:CBL14621.1};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L4S6_9FIRM
L1_007_365G1_scaffold_447_5
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3709..4173)
DNA (465bp) protein (155aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E5Z4_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCX83526.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_447_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4185..5003)
DNA (819bp) protein (273aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Glutamate racemase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L4S8_9FIRM
L1_007_365G1_scaffold_447_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5142..5930
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=root RepID=R5DTS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83528.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_365G1_scaffold_447_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6141..6290
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=2 Tax=Ruminococcus RepID=D4L4S9_9FIRM
LSU ribosomal protein L33P
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_447_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6303..6560
DNA (258bp) protein (86aa)
Protein translocase subunit SecE n=2 Tax=Ruminococcus RepID=D4L4T0_9FIRM
preprotein translocase, SecE subunit, bacterial
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_447_10
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6605..7132
DNA (528bp) protein (176aa)
Transcription termination/antitermination protein NusG n=2 Tax=Ruminococcus RepID=D4L4T1_9FIRM
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_365G1_scaffold_447_11

Not on your lists


7246..7671
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=3 Tax=root RepID=D4L4T2_9FIRM
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000313|EMBL:EKC61940.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_365G1_scaffold_447_12
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7728..8423
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=2 Tax=Ruminococcus RepID=D4L4T3_9FIRM
LSU ribosomal protein L1P
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_447_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8621..9181
DNA (561bp) protein (187aa)
50S ribosomal protein L10 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXD7_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
50S ribosomal protein L10
L1_007_365G1_scaffold_447_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9235..9612
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=2 Tax=Ruminococcus RepID=D4L4T4_9FIRM
LSU ribosomal protein L12P
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_365G1_scaffold_447_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9919..11523
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=2 Tax=root RepID=R5E602_9FIRM
L1_007_365G1_scaffold_447_16
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11637..12065)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L4T6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14631.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_447_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12192..12974
DNA (783bp) protein (261aa)
Enterochelin esterase and related enzymes n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L4T7_9FIRM
Enterochelin esterase and related enzymes
Enterochelin esterase and related enzymes {ECO:0000313|EMBL:CBL14632.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_447_18
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12979..13503
DNA (525bp) protein (175aa)
Acetyltransferases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L4T8_9FIRM
Acetyltransferases
Acetyltransferases {ECO:0000313|EMBL:CBL14633.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_447_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13572..14141)
DNA (570bp) protein (190aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Phosphate propanoyltransferase n=2 Tax=Ruminococcus RepID=D4L4T9_9FIRM
Propanediol utilization protein
L1_007_365G1_scaffold_447_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14260..14835
DNA (576bp) protein (192aa)
uracil-DNA glycosylase, family 4 (EC:2.7.7.7)
Uracil-DNA glycosylase family 4 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E471_9FIRM
Uracil-DNA glycosylase family 4 {ECO:0000313|EMBL:CCX83547.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_365G1_scaffold_447_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15017..15718
DNA (702bp) protein (234aa)
ABC-type antimicrobial peptide transport system, ATPase component n=3 Tax=root RepID=D4L4U1_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL14636.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_447_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15741..19160
DNA (3420bp) protein (1140aa)
ABC-type transport system involved in lipoprotein release permease component n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTL1_9FIRM
ABC-type transport system involved in lipoprotein release permease component {ECO:0000313|EMBL:CCX83550.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type transport system, involved in lipoprotein release, permease component
L1_007_365G1_scaffold_447_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19296..21044
DNA (1749bp) protein (583aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E474_9FIRM
Aspartate--tRNA ligase 1 {ECO:0000313|EMBL:CCX83552.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_365G1_scaffold_447_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21134..21412
DNA (279bp) protein (93aa)
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit (EC:6.3.5.6 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Ruminococcus RepID=D4L4U4_9FIRM
L1_007_365G1_scaffold_447_25
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21425..22879
DNA (1455bp) protein (485aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.- 6.3.5.7 6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120, ECO:0000313|EMBL:CBL14640.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L4U5_9FIRM
L1_007_365G1_scaffold_447_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22876..24288
DNA (1413bp) protein (471aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=root RepID=R5DTV0_9FIRM
L1_007_365G1_scaffold_447_27
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24318..24740
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83563.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_447_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25062..25586)
DNA (525bp) protein (175aa)
GCN5-related N-acetyltransferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXF8_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCX83564.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
N-acetyltransferase GCN5
L1_007_365G1_scaffold_447_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25760..27133)
DNA (1374bp) protein (458aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
pyridoxal-phosphate dependent TrpB-like enzyme (EC:4.2.1.20)
Tryptophan synthase beta chain 1 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E623_9FIRM
L1_007_365G1_scaffold_447_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27416..28333
DNA (918bp) protein (306aa)
Phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) n=2 Tax=root RepID=D4L4U7_9FIRM
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
Phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CBL14642.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 1-30 of 117 in total

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