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L1_007_365G1_scaffold_511

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_511_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

145..318
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2CA36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK43595.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_007_365G1_scaffold_511_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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411..809
DNA (399bp) protein (133aa)
Resolvase protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CFJ9_9CLOT
Resolvase protein {ECO:0000313|EMBL:ERI66126.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_365G1_scaffold_511_3
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

806..2575
DNA (1770bp) protein (590aa)
TnpX site-specific recombinase family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B1M2_9CLOT
TnpX site-specific recombinase family protein {ECO:0000313|EMBL:ERI66125.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L1_007_365G1_scaffold_511_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2972..4261
DNA (1290bp) protein (430aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLA6_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCX81035.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_511_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4261..4725
DNA (465bp) protein (155aa)
Predicted flavin-nucleotide-binding protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L589_9FIRM
Predicted flavin-nucleotide-binding protein
Predicted flavin-nucleotide-binding protein {ECO:0000313|EMBL:CBL14784.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_511_6
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4770..5750
DNA (981bp) protein (327aa)
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D (EC:3.5.1.1)
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWP7_9FIRM
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D {ECO:0000313|EMBL:CCX81042.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_365G1_scaffold_511_7
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5824..7125)
DNA (1302bp) protein (434aa)
Sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2) n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L585_9FIRM
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
Sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2) {ECO:0000313|EMBL:CBL14780.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_511_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7319..7879)
DNA (561bp) protein (187aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWQ2_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX81047.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_511_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8206..10497
DNA (2292bp) protein (764aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685, ECO:0000313|EMBL:CBL14779.1};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L584_9FIRM
L1_007_365G1_scaffold_511_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10630..12429
DNA (1800bp) protein (600aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4L583_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL14778.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
hypothetical protein
L1_007_365G1_scaffold_511_11
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12444..13352
DNA (909bp) protein (303aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L582_9FIRM
Predicted esterase of the alpha-beta hydrolase superfamily
Predicted esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:CBL14777.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_511_12
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13415..14062
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L581_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14776.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_511_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14314..14493
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81057.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_511_14
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14501..15574
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=2 Tax=Ruminococcus RepID=D4L580_9FIRM
bacterial peptide chain release factor 1 (bRF-1)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_511_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15519..16622
DNA (1104bp) protein (368aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLC8_9FIRM
ywlC; putative tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
L1_007_365G1_scaffold_511_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16609..17220
DNA (612bp) protein (204aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYM0_9FIRM
L1_007_365G1_scaffold_511_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17225..17845
DNA (621bp) protein (207aa)
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (EC:3.2.1.-)
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) {ECO:0000313|EMBL:CBL14774.1}; EC=3.2.1.- {ECO:0000313|EMBL:CBL14774.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L579_9FIRM
L1_007_365G1_scaffold_511_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17932..19344
DNA (1413bp) protein (471aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
M18 family aminopeptidase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLJ2_9FIRM
Aspartyl aminopeptidase
L1_007_365G1_scaffold_511_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19811..20110
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81064.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_511_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20351..21625
DNA (1275bp) protein (425aa)
Pullulanase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLD3_9FIRM
Pullulanase {ECO:0000313|EMBL:CCX81065.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_511_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21744..23057)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81067.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_511_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23060..23791)
DNA (732bp) protein (244aa)
Response regulator of the LytR/AlgR family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLJ7_9FIRM
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CCX81068.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Response regulator of the LytR/AlgR family
L1_007_365G1_scaffold_511_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24041..24544
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81069.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_365G1_scaffold_511_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24834..25781)
DNA (948bp) protein (316aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.29)
Lactate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CBL14770.1}; EC=1.1.1.29 {ECO:0000313|EMBL:CBL14770.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Lactate dehydrogenase and related dehydrogenases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L575_9FIRM
L1_007_365G1_scaffold_511_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25894..26604
DNA (711bp) protein (237aa)
Predicted hydrolase (HAD superfamily) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYM7_9FIRM
Predicted hydrolase (HAD superfamily) {ECO:0000313|EMBL:CCX81071.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted hydrolase (HAD superfamily)
L1_007_365G1_scaffold_511_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26808..30575
DNA (3768bp) protein (1256aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=3 Tax=root RepID=R5DWR9_9FIRM
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CCX81072.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_365G1_scaffold_511_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30754..31017
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L569_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14764.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_511_28
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

31020..31850
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Fusobacterium nucleatum RepID=H1HEY4_FUSNU
Uncharacterized protein {ECO:0000313|EMBL:ERT35062.1}; TaxID=1316586 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum CTI-5.;"
hypothetical protein
L1_007_365G1_scaffold_511_29
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31966..32934)
DNA (969bp) protein (323aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region n=2 Tax=root RepID=D4L568_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_511_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33010..33627)
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DQK6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14762.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 1-30 of 49 in total

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