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L1_007_365G1_scaffold_1039

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1039_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(322..1344)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NCP2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39614.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_1039_2
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1436..1981)
DNA (546bp) protein (182aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NCP1_CLOSV
L1_007_365G1_scaffold_1039_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1985..2416)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NCP0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39616.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_1039_4
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3360..4694)
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=Clostridiales RepID=B0NCN8_CLOSV
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L1_007_365G1_scaffold_1039_5
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4982..8740)
DNA (3759bp) protein (1253aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EDS07738.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EDS07738.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NCN7_CLOSV
L1_007_365G1_scaffold_1039_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8832..9539)
DNA (708bp) protein (236aa)
Integral membrane protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQR9_9FIRM
Integral membrane protein {ECO:0000313|EMBL:EGN39619.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
integral membrane protein TIGR01906
L1_007_365G1_scaffold_1039_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9636..10526
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KR87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39620.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Transcriptional regulator
L1_007_365G1_scaffold_1039_8
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10550..12931)
DNA (2382bp) protein (794aa)
DEAD2 domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NCN4_CLOSV
DEAD2 domain protein {ECO:0000313|EMBL:EDS07735.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Rad3-related DNA helicases
L1_007_365G1_scaffold_1039_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12996..13763)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KR88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39622.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_1039_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13741..15069)
DNA (1329bp) protein (443aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NCN2_CLOSV
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:EDS07733.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted DNA-binding protein with the Helix-hairpin-helix motif
L1_007_365G1_scaffold_1039_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15162..15704)
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NCN1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39624.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_1039_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15868..17655
DNA (1788bp) protein (596aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme n=2 Tax=Clostridiales RepID=F7KQS2_9FIRM
L1_007_365G1_scaffold_1039_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17722..18555)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NAS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39626.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ATPases involved in chromosome partitioning
L1_007_365G1_scaffold_1039_14
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18588..18965)
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=2 Tax=Clostridiales RepID=F7KR90_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:EGN39627.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
endoribonuclease L-PSP, putative
L1_007_365G1_scaffold_1039_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18968..19918)
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=F7KQS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39628.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ornithine cyclodeaminase
L1_007_365G1_scaffold_1039_16
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19920..21323)
DNA (1404bp) protein (468aa)
MATE efflux family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NCM4_CLOSV
MATE efflux family protein {ECO:0000313|EMBL:EDS07725.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_365G1_scaffold_1039_17
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21406..22050)
DNA (645bp) protein (215aa)
Acetyltransferase GNAT family n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6RKW6_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDC35107.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_007_365G1_scaffold_1039_18
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22138..22962
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04712.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
MerR family transcriptional regulator
L1_007_365G1_scaffold_1039_19
unknown

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comp(22959..23534)
DNA (576bp) protein (192aa)

This feature has no annotations

L1_007_365G1_scaffold_1039_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23527..25236)
DNA (1710bp) protein (570aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
isoamylase (EC:3.2.1.-)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQS5_9FIRM
Displaying 20 items

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