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L1_007_365G1_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 246 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_20_1
unknown

Not on your lists

2..142
DNA (141bp) protein (47aa)

This feature has no annotations

L1_007_365G1_scaffold_20_2
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

238..762
DNA (525bp) protein (175aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8U4_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGG85054.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
RNA polymerase ECF subfamily sigma factor
L1_007_365G1_scaffold_20_3
unknown

Not on your lists

746..1357
DNA (612bp) protein (204aa)

This feature has no annotations

L1_007_365G1_scaffold_20_4
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1414..3780
DNA (2367bp) protein (789aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98468.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
transglutaminase domain-containing protein
L1_007_365G1_scaffold_20_5
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3804..5195
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BVU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75926.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L1_007_365G1_scaffold_20_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5293..6492)
DNA (1200bp) protein (400aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EDS05561.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EDS05561.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EDS05561.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NIM0_CLOSV
L1_007_365G1_scaffold_20_7
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6951..8318
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7V082_EEGSY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK44175.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
L1_007_365G1_scaffold_20_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8388..10055
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MXL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03545.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L1_007_365G1_scaffold_20_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10262..10918
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NIM1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34100.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted membrane protein
L1_007_365G1_scaffold_20_10
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11237..11422
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Erysipelothrix rhusiopathiae RepID=F5WVB3_ERYRF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK32695.1}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae (strain Fujisawa).;"
L1_007_365G1_scaffold_20_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11411..12760)
DNA (1350bp) protein (450aa)
MatE family protein n=1 Tax=Clostridium difficile CD69 RepID=T2ZZQ0_CLODI
MATE efflux family protein {ECO:0000313|EMBL:EEA82922.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_20_12
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12747..13607)
DNA (861bp) protein (287aa)
Transcriptional regulator, AraC family n=4 Tax=Firmicutes RepID=D4KN89_9FIRM
transcriptional regulator, AraC family
AraC family Bacterial regulatory helix-turn-helix protein {ECO:0000313|EMBL:EFV17558.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_007_365G1_scaffold_20_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13807..14031
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NED9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34068.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_20_14
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14175..14555
DNA (381bp) protein (127aa)
undecaprenol kinase (EC:2.7.1.66 2.7.1.107)
Prokaryotic diacylglycerol kinase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NED8_CLOSV
Prokaryotic diacylglycerol kinase {ECO:0000313|EMBL:EDS07156.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L1_007_365G1_scaffold_20_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14650..14997
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34066.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_20_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14990..16573
DNA (1584bp) protein (528aa)
ABC1 family protein n=2 Tax=Clostridiales RepID=B0NED6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34065.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted unusual protein kinase
L1_007_365G1_scaffold_20_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16627..16971)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NEB6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34049.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_20_18
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17143..19263
DNA (2121bp) protein (707aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037596C0
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK43748.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
L1_007_365G1_scaffold_20_19
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19281..21848
DNA (2568bp) protein (856aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CPQ3_9CLOT
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI69286.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L1_007_365G1_scaffold_20_20
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21925..22725)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEB5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS07133.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_365G1_scaffold_20_21
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22718..23605)
DNA (888bp) protein (296aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0NEB4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34047.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ABC transporter
L1_007_365G1_scaffold_20_22
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23602..24228)
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEB3_CLOSV
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDS07131.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
TetR family transcriptional regulator
L1_007_365G1_scaffold_20_23
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24351..24974)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MWW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75268.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L1_007_365G1_scaffold_20_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25080..25979
DNA (900bp) protein (300aa)
Putative membrane protein n=2 Tax=Clostridiales RepID=B0NEB1_CLOSV
Putative membrane protein {ECO:0000313|EMBL:EDS07129.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L1_007_365G1_scaffold_20_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25972..26457
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NEB0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34043.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
HD domain.
L1_007_365G1_scaffold_20_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26488..26940
DNA (453bp) protein (151aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridiales RepID=B0NEA9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34042.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_20_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26941..27387
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNC4_9FIRM
L1_007_365G1_scaffold_20_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27590..28093
DNA (504bp) protein (168aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridiales RepID=B0NEA7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34040.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_20_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28115..30460
DNA (2346bp) protein (782aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0NEA6_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS07124.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_365G1_scaffold_20_30
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30462..32276
DNA (1815bp) protein (605aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34038.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ABC-type multidrug transport system, ATPase and permease components
Displaying items 1-30 of 246 in total

View Taxonomy