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L1_007_365G1_scaffold_224

Search features with annotation key words

Displaying items 1-30 of 144 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_224_1
unknown

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3..80
DNA (78bp) protein (26aa)

This feature has no annotations

L1_007_365G1_scaffold_224_2
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1127..3667
DNA (2541bp) protein (847aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHM8_CLOSV
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EDS05864.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L1_007_365G1_scaffold_224_3
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3682..4842
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHM9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05865.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted permease
L1_007_365G1_scaffold_224_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5011..5619)
DNA (609bp) protein (203aa)
Spore maturation protein A n=2 Tax=Clostridiales RepID=B0NHN0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38811.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
nucleoside recognition domain containing protein
L1_007_365G1_scaffold_224_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5738..6712)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38810.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
M19 family peptidase
L1_007_365G1_scaffold_224_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6814..8052)
DNA (1239bp) protein (413aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38809.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_224_7
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8217..9572)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6TAG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC55777.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L1_007_365G1_scaffold_224_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9577..10107)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38808.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_224_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10255..10788
DNA (534bp) protein (178aa)
Transporter gate domain protein n=2 Tax=Clostridiales RepID=B0NHN4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38807.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Uncharacterized membrane protein
L1_007_365G1_scaffold_224_10
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10807..11739)
DNA (933bp) protein (311aa)
Putative LysR family transcriptional regulator n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TE43_9FIRM
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:CDC71708.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative LysR family transcriptional regulator
L1_007_365G1_scaffold_224_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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11966..13138
DNA (1173bp) protein (391aa)
Predicted amidohydrolase n=2 Tax=Clostridium RepID=D8GSD8_CLOLD
Predicted amidohydrolase
Predicted amidohydrolase {ECO:0000313|EMBL:CBL42777.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_224_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13135..14163
DNA (1029bp) protein (343aa)
TRAP transporter solute receptor, DctP family n=2 Tax=Clostridium symbiosum RepID=U2DG49_CLOSY
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:ERI80442.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
TRAP dicarboxylate family transporter subunit DctP
L1_007_365G1_scaffold_224_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14180..14680
DNA (501bp) protein (167aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C8U2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95617.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L1_007_365G1_scaffold_224_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14677..15966
DNA (1290bp) protein (430aa)
TRAP transporter, DctM subunit n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BQM2_CLOSY
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ERI80444.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
TRAP transporter, DctM subunit
L1_007_365G1_scaffold_224_15
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15999..17015
DNA (1017bp) protein (339aa)
Oxidoreductase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KZD7_OSCVS
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:BAL01329.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_007_365G1_scaffold_224_16
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17031..17711
DNA (681bp) protein (227aa)
Aldolase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KZD8_OSCVS
aldolase
Aldolase {ECO:0000313|EMBL:BAL01330.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_007_365G1_scaffold_224_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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17876..19240
DNA (1365bp) protein (455aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38806.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_224_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19237..19881
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38805.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_224_19
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19832..23176
DNA (3345bp) protein (1115aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38804.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
SMC domain-containing protein
L1_007_365G1_scaffold_224_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23365..24561)
DNA (1197bp) protein (399aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUA9_9CLOT
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EEG57318.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
alcohol dehydrogenase GroES domain-containing protein
L1_007_365G1_scaffold_224_21
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24763..25554)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00036D274D
hypothetical protein
Tax=BJP_IG2157_Clostridiales_52_13
L1_007_365G1_scaffold_224_22
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25756..26553
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IL69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22665.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
xylose isomerase domain-containing protein
L1_007_365G1_scaffold_224_23
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26571..28070
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J3N8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28718.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ABC transporter-like protein
L1_007_365G1_scaffold_224_24
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28086..29018
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JC45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28717.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ABC transporter permease
L1_007_365G1_scaffold_224_25
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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29103..30245
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J3W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28716.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L1_007_365G1_scaffold_224_26
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30271..31230
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J3E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28715.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
inner-membrane translocator
L1_007_365G1_scaffold_224_27
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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31282..32415
DNA (1134bp) protein (378aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
mta:Moth_2268 alcohol dehydrogenase id=1245721 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
L1_007_365G1_scaffold_224_28
Thermoanaerobacter sp. X514, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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32428..33339
DNA (912bp) protein (304aa)
Xylose isomerase domain protein TIM barrel n=4 Tax=Thermoanaerobacter RepID=B0K616_THEPX
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABY92292.1}; TaxID=399726 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. (strain X514).;"
L1_007_365G1_scaffold_224_29
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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33373..34494
DNA (1122bp) protein (374aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE82932.1}; TaxID=59505 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii.;"
PfkB domain protein id=4494680 bin=GWF2_Firmicute_57_13 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Firmicute_57_13 organism_group=Firmicute
L1_007_365G1_scaffold_224_30
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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34504..35652
DNA (1149bp) protein (383aa)
Oxidoreductase domain protein n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZWZ4_THEET
Oxidoreductase domain protein {ECO:0000313|EMBL:EGD51357.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter ethanolicus JW 200.;"
oxidoreductase domain-containing protein
Displaying items 1-30 of 144 in total

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