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L1_007_365G1_scaffold_356

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_356_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..437)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NFN2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32610.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_356_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

676..1215
DNA (540bp) protein (180aa)
Flavin reductase n=2 Tax=Clostridiales RepID=B0NFN3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32611.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
NADPH-dependent FMN reductase
L1_007_365G1_scaffold_356_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1223..2197)
DNA (975bp) protein (325aa)
Transporter, auxin efflux carrier (AEC) family protein n=2 Tax=Clostridiales RepID=B0NFN4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32612.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted permeases
L1_007_365G1_scaffold_356_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2369..2920
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=2 Tax=Clostridiales RepID=B0NFN6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32613.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L1_007_365G1_scaffold_356_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2898..3659
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NFN7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32614.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_356_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3643..4530
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32615.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ABC-type multidrug transport system, ATPase component
L1_007_365G1_scaffold_356_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4517..5728
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32616.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_356_8
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5747..6550)
DNA (804bp) protein (268aa)
Macro domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NFP0_CLOSV
Macro domain protein {ECO:0000313|EMBL:EDS06670.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_365G1_scaffold_356_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6560..7060)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32618.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
putative G/U mismatch-specific DNA glycosylase
L1_007_365G1_scaffold_356_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7075..8733)
DNA (1659bp) protein (553aa)
MutS domain V protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NFP2_CLOSV
MutS domain V protein {ECO:0000313|EMBL:EDS06672.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
DNA mismatch repair protein MutS domain-containing protein
L1_007_365G1_scaffold_356_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8839..10041)
DNA (1203bp) protein (401aa)
Putative prokaryotic N-methylation motif protein n=1 Tax=Clostridium sp. D5 RepID=F0YWV2_9CLOT
Putative prokaryotic N-methylation motif protein {ECO:0000313|EMBL:EGB93440.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_365G1_scaffold_356_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10074..10490)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWV1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93439.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_365G1_scaffold_356_13
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10506..11159)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JNY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY54449.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
L1_007_365G1_scaffold_356_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11213..22360)
DNA (11148bp) protein (3716aa)
Putative prepilin-type N-cleavage/methylation domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YWU9_9CLOT
Putative prepilin-type N-cleavage/methylation domain protein {ECO:0000313|EMBL:EGB93437.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
GLUG domain protein
L1_007_365G1_scaffold_356_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22452..23501)
DNA (1050bp) protein (350aa)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Clostridium sp. D5 RepID=F0YWU8_9CLOT
4-diphosphocytidyl-2C-methyl-D-erythritol kinase {ECO:0000313|EMBL:EGB93436.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
pilT; pili retraction protein PilT
L1_007_365G1_scaffold_356_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23530..25212)
DNA (1683bp) protein (561aa)
Type IV pilus assembly protein PilB n=1 Tax=Clostridium sp. D5 RepID=F0YWU7_9CLOT
Type IV pilus assembly protein PilB {ECO:0000313|EMBL:EGB93435.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
type IV pilus assembly protein PilB
L1_007_365G1_scaffold_356_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25224..25940)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWU6_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93434.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_365G1_scaffold_356_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25921..27414)
DNA (1494bp) protein (498aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWU5_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93433.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_365G1_scaffold_356_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27429..28628)
DNA (1200bp) protein (400aa)
Putative general secretion pathway protein F n=1 Tax=Clostridium sp. D5 RepID=F0YWU4_9CLOT
Putative general secretion pathway protein F {ECO:0000313|EMBL:EGB93432.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative type II secretion pathway protein XcpS
L1_007_365G1_scaffold_356_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28671..29444)
DNA (774bp) protein (258aa)
pilD; type IV prepilin-like leader peptidase PilD (EC:3.4.23.43)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32620.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_356_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29540..29995)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWU2_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93430.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_365G1_scaffold_356_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30038..30469)
DNA (432bp) protein (144aa)
Pilin domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YWU1_9CLOT
Pilin domain protein {ECO:0000313|EMBL:EGB93429.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_365G1_scaffold_356_23
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31108..32157
DNA (1050bp) protein (350aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32621.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_356_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32193..33614
DNA (1422bp) protein (474aa)
Iron-only hydrogenase maturation rSAM protein HydG n=2 Tax=Clostridiales RepID=B0NFP6_CLOSV
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EDS06676.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
iron-only hydrogenase maturation protein HydG
L1_007_365G1_scaffold_356_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33653..34873
DNA (1221bp) protein (407aa)
Hydrogenase maturation GTPase HydF n=2 Tax=Clostridiales RepID=B0NFP7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32623.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
small GTP-binding protein
L1_007_365G1_scaffold_356_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34974..35573
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NFP8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32624.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
membrane protein
L1_007_365G1_scaffold_356_27
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35578..36306)
DNA (729bp) protein (243aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
NAD-dependent protein deacetylase n=2 Tax=Clostridiales RepID=B0NFP9_CLOSV
NAD-dependent protein deacetylase
L1_007_365G1_scaffold_356_28
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36355..37008)
DNA (654bp) protein (218aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NFQ0_CLOSV
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDS06680.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
HAD-superfamily hydrolase
L1_007_365G1_scaffold_356_29
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37200..37655)
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridiales RepID=B0NFQ1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32627.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
transcriptional regulator, MarR family
L1_007_365G1_scaffold_356_30
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37699..38766)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32628.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Dioxygenases related to 2-nitropropane dioxygenase
Displaying items 1-30 of 61 in total

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