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L1_007_365G1_scaffold_384

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_384_1
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1243
-----------------
DNA (1242bp)
protein (414aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EDS08016.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EDS08016.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Clostridiales RepID=B0NBT0_CLOSV
L1_007_365G1_scaffold_384_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1313..1807
-----------------
DNA (495bp)
protein (165aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Clostridiales RepID=B0NBS9_CLOSV
L1_007_365G1_scaffold_384_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1807..1986
-----------------
DNA (180bp)
protein (60aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z336_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91468.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_365G1_scaffold_384_4
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2260..4629
-----------------
DNA (2370bp)
protein (790aa)
Putative formate C-acetyltransferase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C023_9CLOT
Putative formate C-acetyltransferase {ECO:0000313|EMBL:EEG74751.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Formate C-acetyltransferase
L1_007_365G1_scaffold_384_5
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4683..5423
-----------------
DNA (741bp)
protein (247aa)
Glycyl-radical enzyme activating protein family protein {ECO:0000313|EMBL:EEG74750.1}; EC=1.97.1.- {ECO:0000313|EMBL:EEG74750.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
glycyl-radical activating family protein (EC:1.97.1.4)
Glycyl-radical enzyme activating protein family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C022_9CLOT
L1_007_365G1_scaffold_384_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5445..7295
-----------------
DNA (1851bp)
protein (617aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN30777.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted ATP-dependent endonuclease of the OLD family
L1_007_365G1_scaffold_384_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7292..8179)
-----------------
DNA (888bp)
protein (296aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I711_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45963.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_007_365G1_scaffold_384_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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8254..8745
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34416.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L1_007_365G1_scaffold_384_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8717..9040
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BEL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI70625.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L1_007_365G1_scaffold_384_10
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8985..9851
-----------------
DNA (867bp)
protein (289aa)
MCP methyltransferase, CheR-type (EC:2.1.1.80)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FG21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX99131.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L1_007_365G1_scaffold_384_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9867..10241
-----------------
DNA (375bp)
protein (125aa)
Two-component system, chemotaxis family, response regulator CheY n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG07_9FIRM
Two-component system, chemotaxis family, response regulator CheY {ECO:0000313|EMBL:EGN34413.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
response regulator receiver protein
L1_007_365G1_scaffold_384_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10252..11928
-----------------
DNA (1677bp)
protein (559aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34412.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
methyl-accepting chemotaxis sensory transducer
L1_007_365G1_scaffold_384_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11942..12553
-----------------
DNA (612bp)
protein (204aa)
cheC; Chemotaxis protein CheY-P phosphatase CheC (EC:3.-.-.-)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RJQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ38836.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L1_007_365G1_scaffold_384_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12557..13033
-----------------
DNA (477bp)
protein (159aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG04_9FIRM
CheD family protein
L1_007_365G1_scaffold_384_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13054..14007
-----------------
DNA (954bp)
protein (318aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CTH3_9CLOT
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI70631.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
chemosensory protein
L1_007_365G1_scaffold_384_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14008..16014
-----------------
DNA (2007bp)
protein (669aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2KRT2_9FIRM
chemotaxis protein CheA
L1_007_365G1_scaffold_384_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16019..16456
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34406.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L1_007_365G1_scaffold_384_18
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16551..17330
-----------------
DNA (780bp)
protein (260aa)
Dinitrogenase iron-molybdenum cofactor n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBS6_CLOSV
Dinitrogenase iron-molybdenum cofactor {ECO:0000313|EMBL:EDS08012.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted DNA-binding proteins
L1_007_365G1_scaffold_384_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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17505..18248
-----------------
DNA (744bp)
protein (248aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PS08_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFB74536.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_365G1_scaffold_384_20
unknown

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18285..20024
-----------------
DNA (1740bp)
protein (580aa)

This feature has no annotations

L1_007_365G1_scaffold_384_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20047..23754
-----------------
DNA (3708bp)
protein (1236aa)
NB-ARC domain./Protein kinase domain n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X532_9CLOT
NB-ARC domain./Protein kinase domain {ECO:0000313|EMBL:CDA10793.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
NB-ARC domain./Protein kinase domain.
L1_007_365G1_scaffold_384_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23732..26917
-----------------
DNA (3186bp)
protein (1062aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22296.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_365G1_scaffold_384_23
unknown

Not on your lists

27037..27789
-----------------
DNA (753bp)
protein (251aa)

This feature has no annotations

L1_007_365G1_scaffold_384_24
Acholeplasma sp. CAG:878, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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27804..29309
-----------------
DNA (1506bp)
protein (502aa)
Putative phage head-tail adaptor n=1 Tax=Acholeplasma sp. CAG:878 RepID=R5HC86_9MOLU
Putative phage head-tail adaptor {ECO:0000313|EMBL:CCY27330.1}; TaxID=1262686 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma; environmental samples.;" source="Acholeplasma sp. CAG:878.;"
Type IV secretory pathway, VirD4 components
L1_007_365G1_scaffold_384_25
unknown

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29309..30097
-----------------
DNA (789bp)
protein (263aa)

This feature has no annotations

L1_007_365G1_scaffold_384_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30110..31582
-----------------
DNA (1473bp)
protein (491aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61236.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_007_365G1_scaffold_384_27
unknown

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31579..33213
-----------------
DNA (1635bp)
protein (545aa)

This feature has no annotations

L1_007_365G1_scaffold_384_28
unknown

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33252..33854
-----------------
DNA (603bp)
protein (201aa)

This feature has no annotations

L1_007_365G1_scaffold_384_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33871..35208
-----------------
DNA (1338bp)
protein (446aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET96_9FIRM
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EEQ61240.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cell division protein FtsW
L1_007_365G1_scaffold_384_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35189..36592
-----------------
DNA (1404bp)
protein (468aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET97_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EEQ61241.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ftsI; cell division protein FtsI/penicillin-binding protein 2
Displaying items 1-30 of 61 in total

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