ggKbase home page

L1_007_365G1_scaffold_666

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_666_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..611)
-----------------
DNA (609bp)
protein (203aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KS20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39150.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_666_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1378..2625)
-----------------
DNA (1248bp)
protein (416aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=2 Tax=Clostridiales RepID=B0NA86_CLOSV
L1_007_365G1_scaffold_666_3
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2706..3071)
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NA87_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08580.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Uncharacterized protein with conserved CXXC pairs
L1_007_365G1_scaffold_666_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3073..4059)
-----------------
DNA (987bp)
protein (329aa)
Thioredoxin reductase (EC:1.5.3.1)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Clostridiales RepID=B0NA88_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39153.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_666_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4073..5506)
-----------------
DNA (1434bp)
protein (478aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KS24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39154.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted dehydrogenase
L1_007_365G1_scaffold_666_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5510..7009)
-----------------
DNA (1500bp)
protein (500aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=2 Tax=Clostridiales RepID=B0NA90_CLOSV
L1_007_365G1_scaffold_666_7
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7168..8952)
-----------------
DNA (1785bp)
protein (595aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4V7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72725.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L1_007_365G1_scaffold_666_8
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(9072..9680)
-----------------
DNA (609bp)
protein (203aa)
Class II aldolase/adducin family protein n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HBV7_ILYPC
class II aldolase/adducin family protein
Class II aldolase/adducin family protein {ECO:0000313|EMBL:ADO83869.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
L1_007_365G1_scaffold_666_9
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9682..10962)
-----------------
DNA (1281bp)
protein (427aa)
Hrp-dependent type III effector protein n=8 Tax=Clostridium RepID=N9WSR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26545.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
type III effector Hrp-dependent outer protein
L1_007_365G1_scaffold_666_10
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10981..12267)
-----------------
DNA (1287bp)
protein (429aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BZA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX57967.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L1_007_365G1_scaffold_666_11
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12267..12749)
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZIT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ12459.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
C4-dicarboxylate ABC transporter, permease protein
L1_007_365G1_scaffold_666_12
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12833..13852)
-----------------
DNA (1020bp)
protein (340aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003749105
Uncharacterized protein {ECO:0000313|EMBL:ETA79326.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
C4-dicarboxylate ABC transporter, substrate-binding protein
L1_007_365G1_scaffold_666_13
Oceanobacillus oncorhynchi, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13885..14787)
-----------------
DNA (903bp)
protein (301aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
tartronate semialdehyde reductase n=1 Tax=Clostridium arbusti RepID=UPI000289B3B4
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:CEI80866.1}; TaxID=545501 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus oncorhynchi.;"
L1_007_365G1_scaffold_666_14
Oceanobacillus oncorhynchi, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14806..15282)
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=Lysinibacillus sphaericus OT4b.31 RepID=R7ZIM7_LYSSH
Uncharacterized protein {ECO:0000313|EMBL:CEI80865.1}; TaxID=545501 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus oncorhynchi.;"
hypothetical protein
L1_007_365G1_scaffold_666_15
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15475..17271
-----------------
DNA (1797bp)
protein (599aa)
Transcriptional regulator, Fis family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELY6_9FIRM
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=BJP_IG2157_Clostridiales_35_16
L1_007_365G1_scaffold_666_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17314..17562)
-----------------
DNA (249bp)
protein (83aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KS26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39156.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_666_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17598..19484)
-----------------
DNA (1887bp)
protein (629aa)
Aldehyde ferredoxin oxidoreductase, tungsten cofactor-binding domain protein n=2 Tax=Clostridiales RepID=B0NA92_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39157.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_666_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19481..19906)
-----------------
DNA (426bp)
protein (142aa)
4Fe-4S binding domain protein n=2 Tax=Clostridiales RepID=B0NA93_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39158.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_666_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19924..21111)
-----------------
DNA (1188bp)
protein (396aa)
Lactaldehyde reductase n=1 Tax=Clostridium sp. D5 RepID=F0Z5Q6_9CLOT
Lactaldehyde reductase {ECO:0000313|EMBL:EGB90583.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
iron-containing alcohol dehydrogenase
L1_007_365G1_scaffold_666_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21127..21636)
-----------------
DNA (510bp)
protein (170aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z5Q7_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB90584.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_365G1_scaffold_666_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22013..22222)
-----------------
DNA (210bp)
protein (70aa)
Cold-shock DNA-binding domain protein n=2 Tax=Clostridiales RepID=B0N9A7_CLOSV
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EDS08838.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
cold-shock DNA-binding protein family
L1_007_365G1_scaffold_666_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22509..23393
-----------------
DNA (885bp)
protein (295aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=F7KS30_9FIRM
L1_007_365G1_scaffold_666_23
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23400..23930
-----------------
DNA (531bp)
protein (177aa)
TIGR04002 family protein n=2 Tax=Clostridiales RepID=B0N9A5_CLOSV
TIGR04002 family protein {ECO:0000313|EMBL:EDS08836.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_365G1_scaffold_666_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23955..24551
-----------------
DNA (597bp)
protein (199aa)
Radical SAM domain protein n=2 Tax=Clostridiales RepID=B0N9A4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39162.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Mg-dependent DNase
L1_007_365G1_scaffold_666_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24494..25471
-----------------
DNA (978bp)
protein (326aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KS33_9FIRM
L1_007_365G1_scaffold_666_26
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26167..26988)
-----------------
DNA (822bp)
protein (274aa)
TIGR00268 family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9A2_CLOSV
TIGR00268 family protein {ECO:0000313|EMBL:EDS08833.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
asparagine synthase
L1_007_365G1_scaffold_666_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26985..27752)
-----------------
DNA (768bp)
protein (256aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0N9A1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39165.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
L1_007_365G1_scaffold_666_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27773..28096)
-----------------
DNA (324bp)
protein (108aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KS36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39166.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_666_29
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28206..28436
-----------------
DNA (231bp)
protein (77aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=B0N999_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39167.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_666_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(28528..29094)
-----------------
DNA (567bp)
protein (189aa)
Ribosomal protein L25, Ctc-form n=1 Tax=Clostridium sp. D5 RepID=F0YVY3_9CLOT
Ribosomal protein L25, Ctc-form {ECO:0000313|EMBL:EGB93821.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ribosomal protein L25, Ctc-form
Displaying items 1-30 of 49 in total

View Taxonomy