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L1_007_365G1_scaffold_991

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_991_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..527)
DNA (525bp) protein (175aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Clostridiales RepID=B0NI09_CLOSV
L1_007_365G1_scaffold_991_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(561..2120)
DNA (1560bp) protein (520aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35918.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
LysM domain.
L1_007_365G1_scaffold_991_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2132..2539)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NI11_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35919.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_991_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2659..4167
DNA (1509bp) protein (503aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=2 Tax=Clostridiales RepID=B0NI12_CLOSV
L1_007_365G1_scaffold_991_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4215..4769)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NI13_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35921.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_991_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4801..6786)
DNA (1986bp) protein (662aa)
NADH-dependent flavin oxidoreductase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMI5_9FIRM
NADH-dependent flavin oxidoreductase {ECO:0000313|EMBL:EGN35922.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
NADH:flavin oxidoreductase
L1_007_365G1_scaffold_991_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6814..8247)
DNA (1434bp) protein (478aa)
Bile acid transporter n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMI6_9FIRM
Bile acid transporter {ECO:0000313|EMBL:EGN35923.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_991_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8252..9532)
DNA (1281bp) protein (427aa)
Bile acid-CoA hydrolase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMI7_9FIRM
Bile acid-CoA hydrolase {ECO:0000313|EMBL:EGN35924.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
acyl-CoA transferase/carnitine dehydratase
L1_007_365G1_scaffold_991_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9583..10332)
DNA (750bp) protein (250aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100 1.1.1.159)
Bile acid 7-dehydroxylase 2 n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMI8_9FIRM
Bile acid 7-dehydroxylase 2 {ECO:0000313|EMBL:EGN35925.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_991_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10365..10865)
DNA (501bp) protein (167aa)
Bile acid 7-alpha dehydratase {ECO:0000313|EMBL:EDS05766.1}; EC=4.2.1.106 {ECO:0000313|EMBL:EDS05766.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Bile acid 7-alpha dehydratase n=2 Tax=Clostridiales RepID=B0NI18_CLOSV
hypothetical protein
L1_007_365G1_scaffold_991_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10910..12829)
DNA (1920bp) protein (640aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Clostridiales RepID=B0NI19_CLOSV
Bile acid-inducible operon protein CD {ECO:0000313|EMBL:EGN35927.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
NADH:flavin oxidoreductase
L1_007_365G1_scaffold_991_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12877..14400)
DNA (1524bp) protein (508aa)
Bile acid-coenzyme A ligase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMJ1_9FIRM
Bile acid-coenzyme A ligase {ECO:0000313|EMBL:EGN35928.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
AMP-dependent synthetase and ligase
L1_007_365G1_scaffold_991_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14692..15480
DNA (789bp) protein (263aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=B0NI21_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35929.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_991_14
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15444..15818
DNA (375bp) protein (125aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=B0NI21_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35929.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
AraC family transcriptional regulator
L1_007_365G1_scaffold_991_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15815..16360
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NI22_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35930.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_991_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16438..17172
DNA (735bp) protein (245aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMJ4_9FIRM
L1_007_365G1_scaffold_991_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17198..17791)
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NI24_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35932.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_991_18
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17982..19439
DNA (1458bp) protein (486aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NI25_CLOSV
L1_007_365G1_scaffold_991_19
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19456..20526
DNA (1071bp) protein (357aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=2 Tax=Clostridiales RepID=B0NI26_CLOSV
L1_007_365G1_scaffold_991_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20597..21967
DNA (1371bp) protein (457aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMJ8_9FIRM
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
L1_007_365G1_scaffold_991_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22036..22851
DNA (816bp) protein (272aa)
Cof-like hydrolase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NI28_CLOSV
Cof-like hydrolase {ECO:0000313|EMBL:EDS05776.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_365G1_scaffold_991_22
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22907..23632)
DNA (726bp) protein (242aa)
alpha/beta hydrolase n=1 Tax=Clostridium botulinum RepID=UPI0003699D3D
Uncharacterized protein {ECO:0000313|EMBL:KKB49430.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L1_007_365G1_scaffold_991_23
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23807..24685)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3K5F6_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF27262.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
hypothetical protein
L1_007_365G1_scaffold_991_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24830..25882)
DNA (1053bp) protein (351aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KK57_9FIRM
ribosomal RNA small subunit methyltransferase H
L1_007_365G1_scaffold_991_25
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26077..26559
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HL59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97954.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
Displaying 25 items

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